| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6345 |
|---|
| Symbol | |
|---|
| ID | 8330556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7439494 |
|---|
| End bp | 7440588 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644946774 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003103993 |
|---|
| Protein GI | 256380333 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.378586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAGGC GCCCGCTGAC GGTCCTGCTG GACGGGACCC CGCTGCTGGG GCAGCGCACC
GGGATCGGCC GCTACACCGC GGCGCTGGCC GAGGAGCTGG CGTCGATGGT GGACGAGGTG
GACGTGCGCG CGGTGGCGTT CACGCTGCGC GGGTGGCGGG CGCTGCGGAC GGTGCTGCCG
CACGACGTGG TGGCGCGCGG GCTCCCGGTG TCGGCGCGGC TGCTGCGGCA GTTCTGGCTG
CGCGCGCCGT TCCCTCCGGT GGAGGTGCTC GCGGGGCTGG CGGACGTCAT GCACGCGACG
AACTTCGTGC TGCCGCCGTC GGTGCGGGCC GGTGGCGTGG TGACGATCCA CGACCTGGCG
ATGCTGGACC ACCCCGGCGA CCTGCCGCCG TCGGACGCGC GGCTGCCCGA GCTGGTGCGG
CAGTCGGCCT CGCGGGCGGC GGTGGTGTGC ACGCCGACGC GCGCGGTCGC GGACCAGGTC
GTGGAGCGGC TGGGCGTGCC GGAGGACCGG GTCGTGGTGA CGCCGCTGGG CGTCGACCCG
GCGTGGTTCG CGGCGCGACC GCCGTCGGAC CCGGTGCGGG CGCGGCTGCG GCTGCCGCTG
GAGTACCTGC TGTTCGTGGG CGCGGGCGGG CCGCGCAAGG GGCTGGACCG GCTGATCGCG
GCGCACGCGG CGCGGCCGGA GCTGCCGCCG CTGGTGCTGG CCGGGCCCGG CGAGTCCGGG
GTGGACGGCC GGGTCGTGCG GACCGGGTAC CTGACCGAGA TCGACCTGCG GCGCGTGGTG
GCGGGCGCCT CGGTGCTGGT GCTCCCCTCT CGGGACGAGG GCTTCGGGCT GCCGGTGCTG
GAGGCGTTGG CGTGCAACGT CCCCGTGGTG TGCTCGGACG TGCCCGCGCT GCGCGAGGTG
GCGGGCGGGC ACGCGGTGCA CGTGCCGGTG GGCGACGTCG AGGCGCTGGG CCAGGCGCTG
GTGGAGACCG TGGAAACCCC GCCCAGCCCG GCCGCTCAAG CGGCCAGGCG GGCCCACGCC
TCCGAGTTCA CCTGGCGGCG CACCGCGGAA CTCACCGTGA AGGCTTACGA AAAAGCGGCT
AGACGTCGTC GTTAA
|
|---|
| Protein sequence | MARRPLTVLL DGTPLLGQRT GIGRYTAALA EELASMVDEV DVRAVAFTLR GWRALRTVLP
HDVVARGLPV SARLLRQFWL RAPFPPVEVL AGLADVMHAT NFVLPPSVRA GGVVTIHDLA
MLDHPGDLPP SDARLPELVR QSASRAAVVC TPTRAVADQV VERLGVPEDR VVVTPLGVDP
AWFAARPPSD PVRARLRLPL EYLLFVGAGG PRKGLDRLIA AHAARPELPP LVLAGPGESG
VDGRVVRTGY LTEIDLRRVV AGASVLVLPS RDEGFGLPVL EALACNVPVV CSDVPALREV
AGGHAVHVPV GDVEALGQAL VETVETPPSP AAQAARRAHA SEFTWRRTAE LTVKAYEKAA
RRRR
|
|---|
| |