| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6324 |
|---|
| Symbol | |
|---|
| ID | 8330535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7414605 |
|---|
| End bp | 7415828 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946753 |
|---|
| Product | mannose-6-phosphate isomerase, class I |
|---|
| Protein accession | YP_003103972 |
|---|
| Protein GI | 256380312 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1482] Phosphomannose isomerase |
|---|
| TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.199717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGC TGCACAACGC GGTGCGCGCG TACGCGTGGG GATCGCGTAC CGCCATCGCC
GAGATGCTCG GGCGGGAGGT GCCCGCCCCG CACCCCGAGG CGGAGCTGTG GATGGGCGCC
CACCCCGGCG ACCCGTCCCG CGTCATCGGA CCTGACGGGA CCCGCCGCAG CCTGCTCGAC
CTGCTCGCCG AGGACCCGCG CGGCCAGCTC GGCGCGGGCT GCGCCGAGCG CTTCGGCGGC
AGGCTGCCGT TCCTGCTGAA GGTCCTCGCC GCCGAGGAGC CGCTGAGCCT GCAGGCCCAC
CCGTCCGCCG AGCAGGCCGC CTTCGGGTTC GCCGCCGAGG ACGCCGCGGG CCTTGCCGTG
GACTCGCCGA TAAGGAACTA CAAGGACCCC TCGGCCAAGC CCGAGCTGAT CTGCGCGCTC
ACCGAGTTCC ACGCGCTCGC AGGCTTCCGC GCCCCGGACC GCACGGTCGC GCTGCTCCGC
TCGCTCGACG CGCCCGACCT CGCGCCCTAC ACCGAGCTGC TCGCCGCCCA GCCGGACGGC
AGCGGCCTGC GCGCCCTGTT CACCACCCTG ATCACCCTGC CGCAGAACTC GCTCGACGGG
CTCCTGCCGC AGGTGCTCGA CGCGTGCGTG GCCCACGTGA AGGACCGCGG CGAGTTCGAC
GCCGAGTGCC GCACCGCGCT GGAACTGGGC GAGGCGTACC CCGGCGACGC GGGCGTGCTG
GCCGCGCTGC TGCTCAACCG GATCGTCCTG CGCCCCGGCG AGGCCATCTA CCTGCCCGCG
GGCAACCTGC ACGCCTACCT GCACGGCACC GGCGTGGAGA TCCTCGCCAA CTCGGACAAC
GTGCTGCGCT GCGGCCTCAC GCCCAAGCAC GTCGACGTGC CCGAGCTGAT GCGCGTGCTC
GACTTCAGCA GCGGCGACAT GCCCGTGCAG CGCGGCGAGC CCACCCGGCC CGGCCTGTGG
GTGTACCGCA CCCCGTGCCC CGAGTTCGAG CTGTCCCGCA TCGAGCTGGC GGCGGGCGAG
AGCGTGGAGG TCGACCACGG CGGGCCGCAG ATCGTGCTGT GCGCCGAGGG CTCGGCGACG
CTGTCCGTGC ACCGGGGCGG CCACGCCGAC GTGCTGGAAC TGCGCCGGGG CCAGTCCGTG
TGGCTGCCCG CCGCCGACCC GGCGCTGCGC GTCGAGGCGA CCGAGGACGC CCAGCTGTTC
CGCGCTACCC CCGGTGTTCC GTAG
|
|---|
| Protein sequence | MELLHNAVRA YAWGSRTAIA EMLGREVPAP HPEAELWMGA HPGDPSRVIG PDGTRRSLLD
LLAEDPRGQL GAGCAERFGG RLPFLLKVLA AEEPLSLQAH PSAEQAAFGF AAEDAAGLAV
DSPIRNYKDP SAKPELICAL TEFHALAGFR APDRTVALLR SLDAPDLAPY TELLAAQPDG
SGLRALFTTL ITLPQNSLDG LLPQVLDACV AHVKDRGEFD AECRTALELG EAYPGDAGVL
AALLLNRIVL RPGEAIYLPA GNLHAYLHGT GVEILANSDN VLRCGLTPKH VDVPELMRVL
DFSSGDMPVQ RGEPTRPGLW VYRTPCPEFE LSRIELAAGE SVEVDHGGPQ IVLCAEGSAT
LSVHRGGHAD VLELRRGQSV WLPAADPALR VEATEDAQLF RATPGVP
|
|---|
| |