| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6306 |
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| Symbol | |
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| ID | 8330517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7395702 |
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| End bp | 7396370 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644946737 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_003103956 |
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| Protein GI | 256380296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.262169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATCG TCGTGAAAGG CCGCAACGTC GAGGTGCCCG AGCACTACCG GGTGCACGTC
GCCGAAAAGC TGGCCCGGCT GGAGCGGTAC GACCGCAAGG TCATCCGCTT CGACGTGGAG
CTGTTCCACG AGCCGAACCG CAGGCAGAGC AAGAACTGCC AGCGGGTGGA GATCACCGGC
AAGGGGCGCG GGCCCGTGAT CCGCGCCGAA GCGAGCGCTG GCGACTTCTA CGCCGCGCTC
GACACCGCGG TGGCGAAGCT GGAGAGCAGA CTGCGCCGCA CGCACGACCG CAGGCGCGTG
CACTACGGAC GCAGGGGCAC CACGTCCGTC GCCGAGGCCA CCGGAGGGCT CGCGGACGTG
CTCGTGTCCG ACGGCCAGGC CGCCGCGCAG GGCCGCACCG CGCTCCTGGA GGCGGCGCCC
CAGTCCGAGG ACGGGTACGA CGCCGAGGTG CCCGCTCAGC GCTGGGACGA CGGGCTGGAC
GACAACCTGC CCGGTCAGAT CGTGCGCGAG AAGGAGCACG CGGCCAAGCC CATGACGGTC
GACCAGGCCC TCTACGAGAT GGAGCTCGTG GGCCACGACT TCTACCTCTT CGCGGACGCG
GACTGCGGAC GACCCAGCGT CGTCTACCGG CGCAGGGGAT TCGACTACGG CGTGATCAGG
CTCGCCTGA
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| Protein sequence | MDIVVKGRNV EVPEHYRVHV AEKLARLERY DRKVIRFDVE LFHEPNRRQS KNCQRVEITG
KGRGPVIRAE ASAGDFYAAL DTAVAKLESR LRRTHDRRRV HYGRRGTTSV AEATGGLADV
LVSDGQAAAQ GRTALLEAAP QSEDGYDAEV PAQRWDDGLD DNLPGQIVRE KEHAAKPMTV
DQALYEMELV GHDFYLFADA DCGRPSVVYR RRGFDYGVIR LA
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