Gene Amir_6303 details

Gene Information

• Locus tag: Amir_6303
• ID: 8330514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 7390196
• End bp: 7390597
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644946734
• Product: HAD-superfamily hydrolase, subfamily IA, variant 3
• Protein accession: YP_003103953
• Protein GI: 256380293
• COG category: [R] General function prediction only
• COG ID: [COG1011] Predicted hydrolase (HAD superfamily)
• TIGRFAM ID: [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTGCCTGG TGCGAGGACT GGTGCTCGAC TTCGGCGGCG TGCTGACCGA CAGCGGAAGC 
GAAGAACTCC TGATCGCGGT GGAGAGGGCG CGCCGCGAGG ACATCAGGAC GGCGATCCTG 
AGCAACGCGG ACGGCCGCTG GGCGCCGCCC CGCGAGTGGG GTCACCTGTT CGACGCGGTG 
GTCACCTCGG GGGCCTCGGG CGTGGCCAAG CCGGACGCCG AGATCTACCT GCTCACCGCC 
TCCGAGCTGG GACTGGAGCC GGGGGACTGC GTGTTCGTCG ACGACCTGCC GGTCAACGTG 
CGGGGCGCCG CGGCGGCCGG GATGGTCGGT GTTCACCACA CGTCGGTGGA AACCACCCTC 
CAGGAACTTG AAATCCTCCT GGCAATCCCC CTCAGGGGCT AA 

 

Protein sequence

MCLVRGLVLD FGGVLTDSGS EELLIAVERA RREDIRTAIL SNADGRWAPP REWGHLFDAV 
VTSGASGVAK PDAEIYLLTA SELGLEPGDC VFVDDLPVNV RGAAAAGMVG VHHTSVETTL 
QELEILLAIP LRG