| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6286 |
|---|
| Symbol | |
|---|
| ID | 8330497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7375145 |
|---|
| End bp | 7375897 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644946717 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003103936 |
|---|
| Protein GI | 256380276 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5640] Secreted trypsin-like serine protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.343257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGC CCCGCGCCCT GTCCGCGGCC ATCAGCACCG GCGCCGCGCT CCTGGCGGCA
CTGGCCGTGA CCGCCATCGC GCCCGCGGCC TCCGCCGCCC CCGCGCCCGA CGACCTCTCG
CCCGCCATCA TCGGCGGCGG CACCGCGAGC AACGCCCCGT GGGCGGCGCG CCTGTTCGCG
AACGGCCGGG AGAACTGCTC GGCCACGATC ATCGCGCCGA CCTGGATCCT GACCGCGCAG
CACTGCGTGG CCAGCTCGGC GACCTACACC TTCCGCATCG GCAGCCTCGA CCAGAGCAGC
GGCGGCACGG TGGCGACCGC GACGCAGATC ATCCAGCACC CGTCGGTCGA CCTGGCCCTG
GCGAAGCTGG ACCGCTCGGT GACCGCGACC TACTCGCCGC TCGGGACCAA CGCGGCCGTG
GTGAACGGGC AGACCGTGCA GCTGTACGGC TGGGGCGCGA CCTGCACGAA CCAGCCGGAG
ATCAACTGCC AGTCGCGGTA CCTGAAGGTC GCGGACACGC GGGTGTCGAC CGTGAACGGG
CGGGACTACC GGGGCGGCGT CGCGATCTCG GTGCGCCGGG TGAACGGCAT CGCGGCGGGC
GGGGACTCGG GCGGCCCGAT GTTCGCGACG AGCCCGGTGG ACGGCAGGTA CTACCAGGTC
GGCGTGGCCT CCACGAGCGA CCGGTCGAGC GTGTCGAACT ACACGGCGGT CGGGCAGTAC
CGGTCGTGGA TCCGGCAGTA CGCGGGCGTG TGA
|
|---|
| Protein sequence | MRLPRALSAA ISTGAALLAA LAVTAIAPAA SAAPAPDDLS PAIIGGGTAS NAPWAARLFA
NGRENCSATI IAPTWILTAQ HCVASSATYT FRIGSLDQSS GGTVATATQI IQHPSVDLAL
AKLDRSVTAT YSPLGTNAAV VNGQTVQLYG WGATCTNQPE INCQSRYLKV ADTRVSTVNG
RDYRGGVAIS VRRVNGIAAG GDSGGPMFAT SPVDGRYYQV GVASTSDRSS VSNYTAVGQY
RSWIRQYAGV
|
|---|
| |