Gene Amir_6285 details

Gene Information

• Locus tag: Amir_6285
• ID: 8330496
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 7373630
• End bp: 7374421
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644946716
• Product: protein of unknown function DUF574
• Protein accession: YP_003103935
• Protein GI: 256380275

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.222973
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGAACT CCCCGAGACC GGTGTCGGAC GACCGGGACC GTCCGAACGC GGCTCGGCTG 
TACGACTACT ACCTCGGCGG CGCGCACAAC TTCGCCGTCG ACCGGGAGTT CGCGCTCCGC 
GCGGTCAGCG AGGTGCCCGC CGACGCGATG GTGCAGCACG GCCGCGCGTT CCTGCGGCGC 
GCCGTGAAGC TGTGCCTGGA GCGGGGCATC CGGCAGTTCC TCGACCTCGG GTCCGGCATC 
CCCACGGCGG GCAACGTGCA CGAGGTCGCC CACGAGGTCG ACCCGGACTG CCGCGTGGTC 
TACGTGGACA ACGAGCCCGC GACTGTCGCG CACGCCCGCG CCATGCTGCG CGGGCGGGAG 
GGCGTGGCGA TGGTGGAGGC CGACGTCCGC GACCCGGCCG CGGTGCTGGG CTCGCCGGAG 
TGCCGCGAGC TGCTGGACCT GACGGCGCCG GTCGCGGTGC TGATGGTGGC GATCCTGCCG 
TGCCTGGTGA CGGCCGACCG GCCGGAGCGG GTCGTGGCGG GGTACCGGGA CGTGATGGCG 
GCGGGCAGCC TGCTGGTGTT CACCCACCTC ACCGCGGACT TCCAGCCGGA GGTGGTGGAC 
AAGCTGCTCG GCGTGGCGAC CGACGCGCAC CCGCTCACGC CCAGGACCAA GGCGGAGGTC 
GAGGTGCTGC TGGACGGGTT CGAGCTGCTG GAGCCGGGAC TGGTGCTGTC GTCCAAGTGG 
CGGAGGGAGG GCGACGAGCC GGAGTTCGGC GTCGAGGCCG TGTCGTACGG GGCGGTGGGC 
TTGCGGCGCT GA 

 

Protein sequence

MQNSPRPVSD DRDRPNAARL YDYYLGGAHN FAVDREFALR AVSEVPADAM VQHGRAFLRR 
AVKLCLERGI RQFLDLGSGI PTAGNVHEVA HEVDPDCRVV YVDNEPATVA HARAMLRGRE 
GVAMVEADVR DPAAVLGSPE CRELLDLTAP VAVLMVAILP CLVTADRPER VVAGYRDVMA 
AGSLLVFTHL TADFQPEVVD KLLGVATDAH PLTPRTKAEV EVLLDGFELL EPGLVLSSKW 
RREGDEPEFG VEAVSYGAVG LRR