| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6253 |
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| Symbol | kgd |
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| ID | 8330464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7337165 |
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| End bp | 7340893 |
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| Gene Length | 3729 bp |
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| Protein Length | 1242 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644946684 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_003103903 |
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| Protein GI | 256380243 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.536296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCAGCA GTCCTGCTTC ACAGTTCGGC CCCAACGAGT GGTTGGTCGA GGAGATGTAC
GAGCAGTTCC TCGCCGATCC GTCGTCGGTA GACCCCGCGT GGCACGACTT CTTCGCCGAC
TACAAGTCGA CGCAGCGCAA CGGGTCCACC ACGACCGCCG CCCCCACGGC GGCCACCCAG
GCTGACACCG GGAAGGCCGC GTCGTCGGGC GCGCCCGCGG CGGCCAAGCA GGCCGCGAGC
ACCGCGCCCG CCGCCAAGAC GCCCGCCGCA CCCGCTCCGT CGAGCGCCCC CAAGCCGAAG
GCCGCGGCGC CCGCCAAGCC CGCTGCCGCC CCGGCCGCCA AGCCCGCTCC CGCGCAGGCC
GCCAAGGCCG CGCCGGTGCA GCAGGCGAAG GGGCCCGAGC AGAAGCAGCT GCGCGGAGCC
GCGGCGGCGA TCGCCAAGAA CATGGAGCTG TCGCTGACGG TTCCGACGGC GACCAGCGTG
CGCGCCGTCC CGGCGAAGCT GCTGGCCGAC AACCGGATCG TGATCAACAA CCACCTCAAG
CGCACGCGGG GCGGGAAGGT CTCCTTCACG CACCTGATCG GCTACGCGGT GGTCCGGGCG
CTCCAGGCGT TCCCGAACAT GAACCGGCAC TACGCCGAGA TCAACAACAA GCCGCACGTG
GTCACGCCCG AGCACGTGAA CTTCGGCCTG GCGATCGACC TGCCCGGCAA GGACGGCAGC
CGCACGCTGG TCGTCGCCTC GGTCAAGGGC TGCGAGAACA TGACGTTCAC GCAGTTCTGG
CAGGCCTACG AGGACCTGAT CCGCAAGGCC CGCGGCGGCT CCCTGACCGC CGAGGACTTC
TCCGGCACCA CGATCTCGCT GACCAACCCC GGCACCATCG GCACGAACCA CTCGGTTCCG
CGCCTGACCG CAGGCCAGGG CACGATCGTC GGCGTCGGCG CGATGGAGTA CCCCGCGCAC
TTCCAGGGCA CCAGCGAGCA GGCCCTGACC GACATGGGCG TCAGCAAGAT CATCACGCTG
ACCTCCACGT ACGACCACCG CATCATCCAG GGCGCGGAGT CGGGCGAGTT CCTCAAGCGC
GTCCACCAGC TCCTGCTGGG CGAGGACGGC TTCTACGACG ACGTCTTCAC GTCGCTGCGC
CTGCCGTACG AGCCGATCCG CTGGGTGGCC GACATCCCCG AGGGCGCGGT CGACAAGACC
GCCCGCGTCA TCGAGCTGAT CGACGCGTAC CGCACGCGCG GCCACCTGAT GGCCGACACG
GACCCGCTGA ACTACCGCCA GCGCAAGCAC CAGGACCTCG ACGTCCTGTC GCACGGCCTG
ACCCTGTGGG ACCTGGACCG GGAGTTCCCG GTCGGCGGGT TCGCGGGCAA GGAGCGGATG
CGCCTGCGCG ACATCCTGGG CGTGCTGCGC AACTCCTACT GCCGCACCGT CGGCGTGGAG
TACATGCACA TCCTCGACCC GGAGGAGCGC CTCTGGATCC AGGAGCGCGT CGAGGTCCCG
CACGAGAAGC CCCCGGCCAC CGTGCAGAAG TACATCCTGT CGAAGCTCAA CGCCGCCGAG
GCGTTCGAGA CCTTCCTGCA GACCAAGTAC GTCGGCCAGA AGCGCTTCTC GCTGGAGGGC
GGCGAGACCG TCATCCCGCT GCTCGACGCG GTGCTGGACA AGGCCGCCGA GCACGAGCTG
GACGAGGTCG TCATCGGGAT GCCGCACCGC GGTCGCCTGA ACGTCCTGGC CAACATCGTG
GGCAAGCCGA TCTCGCAGAT CTTCCGCGAG TTCGAGGGCA ACCTCGACCC CGGCCAGGCG
CACGGCTCCG GCGACGTCAA GTACCACCTG GGCGCCGAGG GCAAGTACTT CCGGATGTTC
GGCGACGGCG AGACGAAGGT GTCGCTGACC GCGAACCCGT CGCACCTGGA GGCCGTGGAC
CCGGTGCTGG AGGGCATCGT CCGCGCCAAG CAGGACATCC TGGACATGGG CGGCGAGAGC
TTCCCGGTGC TGCCCGTCGC CATGCACGGC GACGCGGCGT TCGCCGGCCA GGGCGTGGTC
GCCGAGACGC TGAACCTGGC GCTCGTGCGC GGCTACCGCA CCGGCGGCAC GGTCCACGTG
ATCGTCAACA ACCAGGTCGG CTTCACCACC GCGCCGGAGA ACTCGCGCTC GTCGAAGTAC
TCGACGGACG TCGCGAAGAT GATCGGCGCG CCGGTGTTCC ACGTGAACGG CGACGACCCC
GAGGCCTGCT ACTGGGTGGC GAAGCTGGCG GTCGACTACC GCCAGGCGTT CAACAAGGAC
GTCGTCATCG ACATGGTGTG CTACCGCCGT CGCGGGCACA ACGAGGGCGA CGACCCGTCG
ATGACGCAGC CGGCGATGTA CGACGTGATC GACACCAAGC GCTCGGTGCG CAAGACCTAC
ACCGAGGCGC TGATCGGTCG CGGCGACATC TCCGTGGAGG AGGCAGAGAA GGCCCTCCAG
GACTTCTCCT CGCAGCTGGA GCACGTCTTC AACGAGGTGC GCGAGCTGGA GAAGCACCCG
ATCAAGGCGT CCCCCTCGGT GGAGGAGGAG CAGCAGGTCC CGGCGAAGCT TCCGACCGGG
GTGCCGCGCG AGGTGCTGGA GCGCATCGCG GACGCGCACG TGGAGCTGCC CGAGGGCTTC
ACCCCGCACC CGCGCGTCAA GCCGGTGCTG GAGCGGCGCG CCAAGATGGC CCGCGAGGGC
GGCATCGACT GGGCGTACGC GGAGCTGCTG GCGTTCGGCT CGCTGGTGCA CGAGGGCCGC
ACGGTCCGCC TCGCCGGGCA GGACTCGCGG CGCGGCACGT TCACCCAGCG GCACGCGACC
CTGATCGACC GCAAGACCGG TCAGGAGTAC ACGCCGATCC AGAACCTGGC CGACGACCAG
GGCAAGTTCA TGGTCTACGA CTCGGTGCTG TCGGAGTTCG CGGCGCTCGG CTTCGAGTAC
GGCTACTCGG TGGCGAACCC GGACGCGCTG GTGCTGTGGG AGGCGCAGTT CGGCGACTTC
GTCAACGGCG CGCAGCCGAT CATCGACGAG TTCATCTCGT CCGGTGAGGC GAAGTGGGGC
CAGGTCTCGG ACGTCGTGCT GCTGCTGCCG CACGGCCACG AGGGCCAGGG TCCCGACCAC
ACGTCGGGGC GCATCGAGCG GTTCCTCCAG CTGTGCGCCG AGGGCTCGAT GACCATCGCG
GTGCCGTCGA CGCCCGCGAA CTACTTCCAC CTGCTGCGCA GGCACGCCCT CGACGGCGTG
AACCGGCCGC TGGTGGTGTT CACCCCCAAG TCGATGCTGC GCCTGAAGGC CGCCGTCAGC
CCGGTGGAGG ACTTCGTCGA GGAGCGCTTC AAGTCGGTCA TCGACGACGC GGCGATCGAG
GACAACTCGG CCGTCACGAA GGTCCTGCTG TGCAGCGGCA AGATCTACTA CGAGCTGGTG
GCCGAGCGCG AGAAGCGGGG CGCGAAGGAC ACCGCGATCG TGCGCGTCGA GCAGCTGTAC
CCGGTGCCGA AGCGGAAGCT GAACGAGGCG CTGGAGGCCT ACCCGAACGC GAACGACGTG
CGCTGGGTCC AAGAGGAGCC CGCGAACCAG GGCGCGTGGA CGTTCTACGG CCTGCACCTG
CCGGAGCTGC TGCCGGAGCG CTACCGCCTG ACCCGCGTGT CCCGCCGCCG CATGGCCGCC
CCGTCGGCCG GGTCGTCGAA GGTGCACGAG GTCGAGCAGC GCGAGATCAT CACGAAGGCC
TTCGAGTAG
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| Protein sequence | MSSSPASQFG PNEWLVEEMY EQFLADPSSV DPAWHDFFAD YKSTQRNGST TTAAPTAATQ
ADTGKAASSG APAAAKQAAS TAPAAKTPAA PAPSSAPKPK AAAPAKPAAA PAAKPAPAQA
AKAAPVQQAK GPEQKQLRGA AAAIAKNMEL SLTVPTATSV RAVPAKLLAD NRIVINNHLK
RTRGGKVSFT HLIGYAVVRA LQAFPNMNRH YAEINNKPHV VTPEHVNFGL AIDLPGKDGS
RTLVVASVKG CENMTFTQFW QAYEDLIRKA RGGSLTAEDF SGTTISLTNP GTIGTNHSVP
RLTAGQGTIV GVGAMEYPAH FQGTSEQALT DMGVSKIITL TSTYDHRIIQ GAESGEFLKR
VHQLLLGEDG FYDDVFTSLR LPYEPIRWVA DIPEGAVDKT ARVIELIDAY RTRGHLMADT
DPLNYRQRKH QDLDVLSHGL TLWDLDREFP VGGFAGKERM RLRDILGVLR NSYCRTVGVE
YMHILDPEER LWIQERVEVP HEKPPATVQK YILSKLNAAE AFETFLQTKY VGQKRFSLEG
GETVIPLLDA VLDKAAEHEL DEVVIGMPHR GRLNVLANIV GKPISQIFRE FEGNLDPGQA
HGSGDVKYHL GAEGKYFRMF GDGETKVSLT ANPSHLEAVD PVLEGIVRAK QDILDMGGES
FPVLPVAMHG DAAFAGQGVV AETLNLALVR GYRTGGTVHV IVNNQVGFTT APENSRSSKY
STDVAKMIGA PVFHVNGDDP EACYWVAKLA VDYRQAFNKD VVIDMVCYRR RGHNEGDDPS
MTQPAMYDVI DTKRSVRKTY TEALIGRGDI SVEEAEKALQ DFSSQLEHVF NEVRELEKHP
IKASPSVEEE QQVPAKLPTG VPREVLERIA DAHVELPEGF TPHPRVKPVL ERRAKMAREG
GIDWAYAELL AFGSLVHEGR TVRLAGQDSR RGTFTQRHAT LIDRKTGQEY TPIQNLADDQ
GKFMVYDSVL SEFAALGFEY GYSVANPDAL VLWEAQFGDF VNGAQPIIDE FISSGEAKWG
QVSDVVLLLP HGHEGQGPDH TSGRIERFLQ LCAEGSMTIA VPSTPANYFH LLRRHALDGV
NRPLVVFTPK SMLRLKAAVS PVEDFVEERF KSVIDDAAIE DNSAVTKVLL CSGKIYYELV
AEREKRGAKD TAIVRVEQLY PVPKRKLNEA LEAYPNANDV RWVQEEPANQ GAWTFYGLHL
PELLPERYRL TRVSRRRMAA PSAGSSKVHE VEQREIITKA FE
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