| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6252 |
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| Symbol | |
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| ID | 8330463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7331430 |
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| End bp | 7335740 |
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| Gene Length | 4311 bp |
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| Protein Length | 1436 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644946683 |
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| Product | ABC transporter related |
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| Protein accession | YP_003103902 |
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| Protein GI | 256380242 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCGG CGTTGCCGCA GCTCAGGGCC GTCTCCTTCC GGGAGGCGGC CCTGAGTCGT
CCCGGAGGCC GGAAGCGGCC CGCTGATCTG TCGGGGGACC GACCTAGTGT GGAGATCGTG
ACGAACTCCC CCGGTTGGAT CCGCAGACTC GCCTCGGCGT GCTGGCAGCA CCGCTCCCTC
GTGGTGTGGT CGGTGCTCGC CGCCGTCGTC GGCGTGGGCC TGCAGGCGGC CGGGCCGCTG
CTGCTGAAGG TCGCGGTGGA CGACGCGGTG GCCGGGCGGA CCGACCGGCT CGCGCTGCTG
GCCTCGGTGC TGGTGGGGGT GGAGCTGCTG ACGTTCGGCA CCGCGTTCGT CCGGCGGTAC
CTGGGCGGGC GGCTGGCCGT CGACGTGCAG CACGACCTGC GGCAGGCGGT GTTCTCGTCG
GTGCAGCGGC TGGACGGGCA GAAGCAGGAC GTGCTGCGGA CCGGGCAGGT GGTGTCGCGG
TCGATCACCG ACCTGCAGCT GGTGCAGAGC CTGCTGTCGA TGACGCCGCT GGCGTTCGGC
ACGGTCGCGT TCGCGCTGGC CTCGCTGGTC GCGATGTGCT GGCTCTCGCC GCCGCTGACG
CTGATCGCGC TGGTGATCGT GCCCGCCGTG GGGGTGGTGG CCGCGCGGAC CAGGCTGACG
CTGTTCCCGG CGACCTGGTC GGCGCAGCAG CGGGCGGCGG ACGTGGCGCA GCAGGTCGAG
GAGACCGTGA CCGGGGTGCG CGTGGTCAAG GGCTTCGGGC AGGAGACGCG GGAGGTCGCG
GCGCTGGAGC GGCGGGCGCG GGTGCTGTTC GCGGAGCGGA TGCGGGCGGC GCGGCTGACG
GCGCGGCCGT CGGCGACGCT GAACGCGCTG CCGTACGCGG GGCAGGTGGC GGTGCTCGCG
GCGGGCGGGT GGCTGGCGCT GCGCGGCGAG GTGTCGCTGG GGACGTTCCT GGCGTTCGCG
AGCTACGTGG CCGCGCTGAT CGGGCCGACG CGGCTGCTGG CGAGCCTGAT GGTGACGGCG
CAGCTGGCGC GGGCGGGTGT GGAGCGGGTG TACGAGCTGG TCGACTCGCA GTCCGCCGTG
GTGGACGCGC CGGACGCGGT GGACGTGCCC GACGGGCCGG TCGGGGTGCG GCTGGACGGG
GTGGTGTTCG GGTACGCGCG CAGCGAGCCG GTGCTGTCCG GGGTGTCGCT GGAGGTCGCG
CCGGGCGAGA CGCTGGCGCT GGTCGGCACG GCCGGGTCGG GCAAGTCGAC GGTGTCGCTG
CTGCTGCCCC GGTTCTACGA CGTGCACGAG GGCTCGGTGT CGGTCGGCGG GGTCGACGTG
CGCGGGCTGC GGCTGGGGTC GCTGCGGCGG ACCGTGGGGG TGGTGTTCGA GGAGGCGTTC
CTGTTCTCGG ACACGGTGCG GGCGAACATC GCGTACGGGC GGCCGGACGC CACCGACGCG
GAGGTCGAGG CGGCGGCGCG GGCGGCGGAG GCGCACGGGT TCATCTCGGC GCTGCCCGGC
GGGTACGGGG CGGTGGTCGG GGAGCGCGGG CTGACCCTGT CGGGCGGGCA GCGGCAGCGG
GTGGCGCTGG CGCGGGCGCT GCTGTCGGAC CCGAGGGTGC TGGTGCTGGA CGACGCGACG
TCGGCGGTGG ACACGGCGAC CGAGGCGGCG ATCCACCGGA CGCTGGCGTC GGTGACGGCG
ACGCGGACGA CGCTGCTGGT GGCGCACCGG CGGTCGTCGC TGGCGCTGGC GGACCGGATC
GCGGTGCTGG ACGCGGGGCG CGTGGTGGAC GTGGGGGCGC ACGCGGAGCT GTGGGGGCGC
TGCGAGCTGT ACCGGGAGCT GCTGGCGGGG CCGGGTGAGG CGATCGAGCG GGTGGCCGGG
GCGGCGGCCG GGAGCGGCGC TCTCGGGGCA GCCGGTTCAG CGGTGGGCCC GGAGAGCGGG
AACGGCGCGG GTTCGGTCGA CCGGGCCTCG GGCGCGGCGG CGCGGAACGG CGGGGTGAGC
GCGCCCTGGC CGGGTGCGGA CCTGGTCGAG CAGCGCGCGG ACTCGCGACG CGAGGGCGCC
GCGAACCAGT CGCCCAGGGT CTCGGCCGAG CAGACCGCCG AGCGGACCGC CGAGCGGTCC
GGCGCGGACG CCCCGACCTC GGGTGCCGAG TCCGCCCCGA CCTCCGGCGC CGAGTCCGCC
TCGTCGTCCG CCTCGTCGTC CGGCGCGGGG GTGGCGCCGT CGTCCGGCGC GGGATCTGCC
CCGTCGTCCG CCCCCGCAGG CGTGACGCCC GCGCTGTGGC CCGAGGTCGT CGACGACGAG
CTGGTGCTGC GCGCGGAGAA CCGGTCCGTC GCCGCGCCGT CCGGCGGCAG GCGCGGGCCG
GGGACCTCGG CGCTGGCCGG TGGCGCGCCG CCGACCCCGG AGCTGGTCGA GCGGGTGCGG
ACGTTGCCGC CCGCCACCGA GGAGCCCCGG CTGCCCGGCG AGGACCCGAG CGCGCCCGAT
CCGGGGTTCC GGCTGCTCAG GCTGCTGCGC CCGGTGCGCT GGTCGATGGT GGCCGTGGGC
GCGCTGCTGC TCGTGGACAC CGCGCTCGCG ATCGCGCTGC CGAACCTGGT GCGGATCGGC
GTCGACCGGG GCGTCGGCGG CGGCGAGCAG GGTGCGCTGT GGGTGGTGTC GCTGGTCGGG
CTGCTGCTGG TCGCGGTCGG CTGGTGCTCC ACCCGGATCG GCACGGTGCT GACCGCGCGG
GTCGGCGAGC GGCTGCTGTA CCTGCTGCGG GTGCGCAGCT ACGCGCACCT GCAGCGGCTC
GGGCTGGACT ACTACGAGCG CGAGATGGCC GGGCGGATCA TGACCCGGAT GACCACGGAC
GTGGACGCGC TGTCGAGCTT CCTGCAGACC GGGCTGACCA CGTTCGTGAT CAGCGTGCTG
ACCGTGGCGG GCATCGCGGT GGCGCTGGTG GTGACCGATC CGGGGTTGGC GCTGGTGGCG
CTGTCCGTGC TGCCGGTGCT GGCGGTGGCG ACGGTGCTGT TCCAGCGGGT GTCGTCGCGG
GCGTACGCGG AGGCGCGGGA GCGGGTCAGC GCGGTGAACG CGGACCTGCA GGAGAACGTG
TCGGGTCTGC GGGTCGCGCA GGCCTACACG CGGGAGGAGC GGTCGGCGGA GGCGTTCGCC
GCGCGCAGCG ACGCGTACCG GCGGGCCAGG ATCAGGGCGC AGCGGTACAT CGCGACGTAC
TTCCCGTTCC TGGCGCTGCT GTCCGGGGTG GCGCAGGCGG CGGTGCTGGT GGTGGGCGCG
TACCGGGTGG CGGAGGGGAG CCTGTCGCCG GGCGTGCTGC TGGCGTTCGT GCTGTACCTG
GGGCTGTTCT TCTCGCCGCT GTTCCAGCTG TCCGGGGTGT TCGACGGCTA CCAGCAGGCG
CGGGTGGGCC TGGCCCGGAT CGGCGACCTG CTGCGCACCC CGACGACCGT GCCGCCCGCC
GCCGACCCGG CTCCGGTGGA GCGGTTGCGC GGCGAGGTGG AGCTGCGGGA CGTGGTGTTC
CGGTACTCGG GGGCGGAGGA GCCCGCGCTG GACGGGGTGT CGCTGCGGGT GCGGGCGGGC
GAGACGGTGG CGCTGGTCGG GGAGACCGGG GCGGGCAAGT CGACGCTGGT GAAGCTGGTG
GCGCGGTTCT ACGACGTGAC CGGCGGGCGG GTGCTGGTGG ACGGCAGGGA CGTGCGCGAG
TACGACCTCG GCGCGTTCCG GCGGCGGCTG GGCGTGGTGC CGCAGGAGGC GCACCTGTTC
GGCGGGGACG TGGCGGAGAA CGTCGCGTAC GGCAGGCCGG GCGCGACGCC CGCCGAGGTC
GAGGAGGCGG TGCGGGCGGT GGGCGCGCTG CCGGTGGTCG CGGCCCTGCC GAACGGGTTC
AGGCAGCAGG TGGGCGAGCG CGGGCAGGGG CTGTCGGCCG GGCAGCGGCA GCTGGTGGCG
CTCGCGCGGG CGGAGCTGGT GCGCCCGGAC GTGCTGCTGC TGGACGAGGC GACGGCCGCG
CTGGACCCGG CGACCGAGTC GGCGGTGCTG GCGGCGAGCG ACCACCTGTC GGGCAGCAGG
ACCACGTTCG TGGTGGCCCA CCGCCTGGCG ACGGCCGCGC GGGCGGACCG CATCGTGGTC
CTGTCGGGCG GCCGGGTGGC CGAGGAGGGG ACGCACGAGG AGCTGCTGGC GCTGGGCGGG
CAGTACGCGC GCCTGTGGGC GCACGGGGCG CCGGAGCACG GGGGTGTGGA AGGCGCGGGG
GCGGCGGACG AGAGTGCCGC AGACGGGGGC ACGATCGTGG AGGCCTCGGC CACGGCGGGC
ACGCACGGCG TGACCGCGAC CGCCAAGGCG GGTGACGCCC CTGGGGCTTG A
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| Protein sequence | MFAALPQLRA VSFREAALSR PGGRKRPADL SGDRPSVEIV TNSPGWIRRL ASACWQHRSL
VVWSVLAAVV GVGLQAAGPL LLKVAVDDAV AGRTDRLALL ASVLVGVELL TFGTAFVRRY
LGGRLAVDVQ HDLRQAVFSS VQRLDGQKQD VLRTGQVVSR SITDLQLVQS LLSMTPLAFG
TVAFALASLV AMCWLSPPLT LIALVIVPAV GVVAARTRLT LFPATWSAQQ RAADVAQQVE
ETVTGVRVVK GFGQETREVA ALERRARVLF AERMRAARLT ARPSATLNAL PYAGQVAVLA
AGGWLALRGE VSLGTFLAFA SYVAALIGPT RLLASLMVTA QLARAGVERV YELVDSQSAV
VDAPDAVDVP DGPVGVRLDG VVFGYARSEP VLSGVSLEVA PGETLALVGT AGSGKSTVSL
LLPRFYDVHE GSVSVGGVDV RGLRLGSLRR TVGVVFEEAF LFSDTVRANI AYGRPDATDA
EVEAAARAAE AHGFISALPG GYGAVVGERG LTLSGGQRQR VALARALLSD PRVLVLDDAT
SAVDTATEAA IHRTLASVTA TRTTLLVAHR RSSLALADRI AVLDAGRVVD VGAHAELWGR
CELYRELLAG PGEAIERVAG AAAGSGALGA AGSAVGPESG NGAGSVDRAS GAAARNGGVS
APWPGADLVE QRADSRREGA ANQSPRVSAE QTAERTAERS GADAPTSGAE SAPTSGAESA
SSSASSSGAG VAPSSGAGSA PSSAPAGVTP ALWPEVVDDE LVLRAENRSV AAPSGGRRGP
GTSALAGGAP PTPELVERVR TLPPATEEPR LPGEDPSAPD PGFRLLRLLR PVRWSMVAVG
ALLLVDTALA IALPNLVRIG VDRGVGGGEQ GALWVVSLVG LLLVAVGWCS TRIGTVLTAR
VGERLLYLLR VRSYAHLQRL GLDYYEREMA GRIMTRMTTD VDALSSFLQT GLTTFVISVL
TVAGIAVALV VTDPGLALVA LSVLPVLAVA TVLFQRVSSR AYAEARERVS AVNADLQENV
SGLRVAQAYT REERSAEAFA ARSDAYRRAR IRAQRYIATY FPFLALLSGV AQAAVLVVGA
YRVAEGSLSP GVLLAFVLYL GLFFSPLFQL SGVFDGYQQA RVGLARIGDL LRTPTTVPPA
ADPAPVERLR GEVELRDVVF RYSGAEEPAL DGVSLRVRAG ETVALVGETG AGKSTLVKLV
ARFYDVTGGR VLVDGRDVRE YDLGAFRRRL GVVPQEAHLF GGDVAENVAY GRPGATPAEV
EEAVRAVGAL PVVAALPNGF RQQVGERGQG LSAGQRQLVA LARAELVRPD VLLLDEATAA
LDPATESAVL AASDHLSGSR TTFVVAHRLA TAARADRIVV LSGGRVAEEG THEELLALGG
QYARLWAHGA PEHGGVEGAG AADESAADGG TIVEASATAG THGVTATAKA GDAPGA
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