| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6239 |
|---|
| Symbol | |
|---|
| ID | 8330450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7318588 |
|---|
| End bp | 7319619 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644946670 |
|---|
| Product | homoserine O-acetyltransferase |
|---|
| Protein accession | YP_003103889 |
|---|
| Protein GI | 256380229 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2021] Homoserine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGGT GGCGCGACGG CGATCCGGCC GGTGGGAGGA AGTGGCACCG GGGCGCGCTG
CCCGGTCTGC CGTTCCGGCT CGCCTACGAG ACCTGGGGCG AGCCTGACGA CGACCGGTCC
AACGCGGTGC TCGTGCTGCA CGCCCTCACC GGGGACAGCC ACGTCGCCGG ACCCGCCGGT
CCCGGCCACC CGACCGCCGG GTGGTGGGAC GGGCTGGTGG GGCCCGGCCT GGCGCTGGAC
ACCGACCGGT GGTTCGTCGT CGCGCCCAAC GCGCTGGGCG GCTGCCAGGG CAGCACCGGC
CCGTGGGACA CCGCGCCCGA CGGGCGGCCC TGGGGCGAGC GGTTCCCCGC CGTCGGCATC
CGCGACCAGG TGCGGGCCGA GCTGGGGCTG GCCGACGCGC TCGGCGTGCG CTCGTGGGCG
GCGGTCGTCG GCGGGTCCAT GGGCGGGATG CGGGCGCTGG AGTGGGCGGT GACCGCGCCC
GAGCGGGTGC GGTCGCTGCT GGTGCTCGCG GCCCCCGCCG CGTCCGGCGC CGACCAGATC
GCGCTCGCCT CGGCCCAGCT GCACGCCCTC AAGCTGCACC CGCAGGAGGG GATGGCGGTG
GCCAGGCGGA TCGCCCACCA CGGGTACCGC ACCGCCGCCG AGCTCAACGC CCGGTTCGGG
CGGAGCGTCC AGGGGGACGG GCGGTTCGCC GTCGAGTCCT ACCTGGACCA CCAGGCGGAC
AAGCTGGCCG GGAGGTTCGA CCCCGGCAGC TACCGGGTGC TCACCGAGGC CATGAACGGC
CACGACGTGG GCCGGGGCCG GGGAGGGGTG CGCGCGGCGC TGGGCGCGGT GACCGCGCGC
ACCCTCGTCG CCGGGATCGA CACCGACCGG CTCTACCCGC TGGAGCAGCA GCGGGAGCTG
GCCGAGGCGA TCCCCGCAGC GGGCGACCTG CGCGTCGTGG CCTCGCCGTA CGGCCACGAC
GGGTTCCTCG TCGAGGAGGA GCAGGTCGCC GCGCTGCTGG GGGAACTGCT GCGGGTCAGA
AGCCCGCGGT GA
|
|---|
| Protein sequence | MTGWRDGDPA GGRKWHRGAL PGLPFRLAYE TWGEPDDDRS NAVLVLHALT GDSHVAGPAG
PGHPTAGWWD GLVGPGLALD TDRWFVVAPN ALGGCQGSTG PWDTAPDGRP WGERFPAVGI
RDQVRAELGL ADALGVRSWA AVVGGSMGGM RALEWAVTAP ERVRSLLVLA APAASGADQI
ALASAQLHAL KLHPQEGMAV ARRIAHHGYR TAAELNARFG RSVQGDGRFA VESYLDHQAD
KLAGRFDPGS YRVLTEAMNG HDVGRGRGGV RAALGAVTAR TLVAGIDTDR LYPLEQQREL
AEAIPAAGDL RVVASPYGHD GFLVEEEQVA ALLGELLRVR SPR
|
|---|
| |