Gene Amir_6232 details

Gene Information

• Locus tag: Amir_6232
• ID: 8330443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7310055
• End bp: 7312226
• Gene Length: 2172 bp
• Protein Length: 723 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644946664
• Product: hypothetical protein
• Protein accession: YP_003103883
• Protein GI: 256380223

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.352941
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAG CCGAACGCAC CGCGCGGGGC TGGCCGGGGC TCGACCTGCT CGCCCGGCTG 
CCCGCCTGGT CCCGCTTCGT CCTGGTCACC CTGGCGGTCC TCGCCTGCGG TGTGGTCGCC 
TCGCGCCCGG CCACCGCGGC CAAGGACGAG CCGCTGACCG GCGACGCCGC GATCGCCTCG 
GCGGCCGTGG ACGCGCTGCG CCACCCGAGC GCCGCCGACC CGCTGGCCGC GTTCCCCGCC 
GACTTCAACG CGGTGATGGG CCGCAGCCCG AGCGCGGTCC CGGCCGGGGA CGGCACGCTG 
CGCGCGGCGG ACCCGTCCGG CGACTGCTCC GGTCCGGCGG GCGCCACGAC CTGGGACTTC 
GACCTGTCCT GCAAGTCCCA CGACCTCGGC TACGACCTGC TGCGCTACGC GGAGATCAAG 
GGCCAGCCGC TCCCGCAGTC CGCGCGCCGC GAGCTGGACA CCCGGCTGGA GCTGGACATG 
CACGACCGCT GCCGGGTCAA CCCGCGTGGT TCGGAGTCGC AGTGCCACGC GGTGGCCTCG 
GTGTACGCGG CGGGCCTGGA GTTCAACTCG TGGCGGCAGC GCTGGAGCGC GCCCGGCCAC 
GAGCCGGTGC TGGCCTGGGG CTTCGGCAGC GCCGTCGTCG TGCTCCTGCT GCTGGCGCGC 
GTCCCCGGCG CCCGCGCCCG CCGCCGGGAC GAGGGCCCCG AGACCGCGCA CCCCGCGCCG 
CTCCCGGCCA GCCCCGACCG GTACGCCACC TTCCTGCGCC TGGCAGGCAT CGGCCTGGTC 
GTCGCGGGCC AGTCGCTGCT CACCCTCTCC CGCTGGTCCG GCTTCGGCTC CCAGTGGCTG 
TGGGTGGCCG CCTGGGTGCT CCAGGCGGTC CCGGTGTTCT TCTTCGCGGG CGGCCACGCC 
AACCTGCTCG CCTGGCAGGC CGTGCGCGCC GACCACGGCG GGTACGGCCG CTACCTGACC 
GGCCGCCTGA CCTGGCTGCT GCGCCCGGTG CTGGCGTTCG TGCTGGCCTG GCTGGTCCTG 
CCGCTGCCGC TGCAGCTGCT CGACGTGCCC GAGGACGGCG TCGAGCTGTT CGGCAGGCTG 
ATCGCCCAGC CGCTGTGGTT CGTCGGCGTC TACCTGGTCG CGGTCGCCGC CACCCCGCTC 
ATGGCCGCGC TGCACCGCAG GGCCCGCCTG CTCACCCCGT TCGCGCTGGT CGCCCTGATG 
GCGGTGGTGG ACGCGGTCCG GGGCGCCCAC GAGTGGCGCA CCGGCGGCTA CACCACCCTG 
GTGCTGGGCG CGCTGCTGTT CCAGCAGCTC GGCTTCTGCT ACGCGGACGG CTCGCTGGCG 
CGGGTCCGCC GGTCCGCGTA CGCGGGCCTG GCGCTGGTGT CCGCGCCCGC GCTCGGCGCG 
CTGCTCGTGC TCGGCGGCCA CCCCGGCACG GCGGTCGCGC TGCCCGGCGA CGACGCCGCG 
GGCGCCGGGT CGCCCACGGC GCTCCTGCTG GTGCTGGCAC TCGGTCAGCT GTGCCTGGTG 
ATGCTGCTGC GCGAGCGGGC GACCGCGTGG CTGGCGGGCG GCGCGCCGTG GCGGGTGGTG 
CACTACGCGC GCACCGCCCC CATGACCCTG TACCTGGGCT ACCTGACCGC GCTGGCCGCC 
GTCGTCGGCT CACTGGGCCT GCTGGACTCC CCGAGCACCG CGATGACCTG GCTGCTGATC 
TCCGGCGTCC CCCGCTGGCC CGCGCTGCTC GTGCTGCTCC TGCTGCCGCT GCTGCGGGCG 
TTCCACCGCT TCGAGCGGCA CCAGGCGCTC CCGCTGTGCC GGACCAGGGA GACGCACCGC 
ACCAGGCTCG CGGTCACCCT CGGCGTCGGC TACGGCGCGC TGGGCGTGGT CGGGTTCGTG 
GTGACCGGTT TCGCCGGGCA GGCGGGCAGC CTCGGCGGGC TCCAGGTCGA CGCGCTGCAG 
AACCTGATCC ACCTGCTCCT GGGCTGGTAC CTGGTGCACG TGGCCCGCTC CGGGGCCTGC 
CACGACCGGG GGCCGTGGCT GCTGACCGCG CTGGCCTGCG TCCCGCCGAT GCTGGTGCTG 
GAGCCGACCA GCTCGGTGCT GGCGCTGCAC GGGGCGACGA TCGCGGTGGC GCTGCTGGCC 
TCGGCCGCGA AGCAGGACCA GCAGCGCGCA CCAGAGCACT GGCAGCCACG CGAGGCGCTG 
CAGCACCCAT GA 

 

Protein sequence

MSAAERTARG WPGLDLLARL PAWSRFVLVT LAVLACGVVA SRPATAAKDE PLTGDAAIAS 
AAVDALRHPS AADPLAAFPA DFNAVMGRSP SAVPAGDGTL RAADPSGDCS GPAGATTWDF 
DLSCKSHDLG YDLLRYAEIK GQPLPQSARR ELDTRLELDM HDRCRVNPRG SESQCHAVAS 
VYAAGLEFNS WRQRWSAPGH EPVLAWGFGS AVVVLLLLAR VPGARARRRD EGPETAHPAP 
LPASPDRYAT FLRLAGIGLV VAGQSLLTLS RWSGFGSQWL WVAAWVLQAV PVFFFAGGHA 
NLLAWQAVRA DHGGYGRYLT GRLTWLLRPV LAFVLAWLVL PLPLQLLDVP EDGVELFGRL 
IAQPLWFVGV YLVAVAATPL MAALHRRARL LTPFALVALM AVVDAVRGAH EWRTGGYTTL 
VLGALLFQQL GFCYADGSLA RVRRSAYAGL ALVSAPALGA LLVLGGHPGT AVALPGDDAA 
GAGSPTALLL VLALGQLCLV MLLRERATAW LAGGAPWRVV HYARTAPMTL YLGYLTALAA 
VVGSLGLLDS PSTAMTWLLI SGVPRWPALL VLLLLPLLRA FHRFERHQAL PLCRTRETHR 
TRLAVTLGVG YGALGVVGFV VTGFAGQAGS LGGLQVDALQ NLIHLLLGWY LVHVARSGAC 
HDRGPWLLTA LACVPPMLVL EPTSSVLALH GATIAVALLA SAAKQDQQRA PEHWQPREAL 
QHP