| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6210 |
|---|
| Symbol | |
|---|
| ID | 8330421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7277556 |
|---|
| End bp | 7279037 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644946642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003103861 |
|---|
| Protein GI | 256380201 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAAG AACCTGAGCC CAGCGCTGGG GGAAAACCCC GGAACACCCC GCCGGGGAAA
CCCGAGCCCA CCGCCGTCAC CACCGTTGAG CCCTCCCCCG GCAAGCACTT CACCCCCGGC
GCGCCACCCC GACGGCCACT GACCCCCGAG GACGGCGCCC GCCGCGCCAA GGCCGTCCTC
GCCGCGCTCA CCGCCGCGGT GGTCGCCGCG GTCGTCGTCC CCCACGAGAC GCACGGCGTC
GGCTGGCCCA TCGCCGCCGT CGTCGTGCTC GCCCTCGTCG GACGGCGGGT GCGCGTGGGC
TGGGCGGCGC TGTCGGTGCT GCTGGCGTCG GTGGCCGCGT TCCGGGCCTC CGGCTGGCTG
TTCGCCCTGT GCCTGGTCAC CGGCCTGGTC ACCGCCTCGC TGGCGGTCAC CGGCGGGCGC
ACGGTCCGGG GGCTGCTGTG GGGGTCGTTC GCCGTGCCCG CCACCTCGCT GGTGGCGCTG
CCCTGGGGCG CGAGCGGGGT GGCGGCGCAC CGGGCGGGCG GGTGGGTGCG GCCGGTGGTG
CTCACCTGCG TGGTGCTGCT GGTGTTCCTG CCGCTGCTGG CGAGCGCGGA CGAGGCGTTC
GCCGACCTGG TGCTGAGCGT GCTGTCGCAG CCGGGCGCCC CGGCGCCGGT CACCGCGTTC
TTCGGCGCGG CGGCGGGCGC GGGGGTGCTG GCGGCGCGCC GGTTGCAGGC GCTCCCGAAC
ACCTCCGACC GGCCGCTCGA CCCGGCCCGG CCGGTGGCGC GCCGGGACTG GGCGCTGCCG
GTGGGGGCGC TGGTGGCGCT GTTCACCGCG TTCGTGGCCG TGCAGCTGCG CACCCTGTTC
GGCGGCGACC GGCACGTGCA GGTGACCGCC GACCTGACGT ACGCCGACTA CGCGCGCGGC
GGCTTCGGCC AGCTCGTGGT GGTCACCCTG CTGACGCTGG GCGTGCTCGG CGCGGTGTCC
CGGTTCGCCT CGCGCGCCAC CGGGCGGGAC CGGGTGTGGC TGCGGGCCCT GCCGGGGGCG
CTGTGCGCGC TGACCCTGGT CATCGTCGCC TCGGCCGTGC ACCGCATGTG GCTCTACCAG
CGGGCCTACG GGTTCACCGA GCAGCGCGTG CTGGCGCTGG CCGCCGAGCT GTGGCTGGGC
CTGGTGTGCC TGGTGGTGCT GGCCGCCGGG GTGCGGCTGT CGGCGGCCTG GCTGCCGAGG
GCGGTGGTGG CGACGGCGGC GGGCGCGGTG CTGGCGCTGG CCGTCGCCAA CCCGGACCTG
CTCGTCGCGG AGGCCAACGT GGCGCGCTAC GAGGCCACCG GGCGGATCGA CCAGCCCTAC
CTGACCACGC TGTCCGTGGA CGCCGCCCCG GCGCTGGCGC GGCTGCCCAA GGAGCTGCGG
GTCTGCCACT GGCCGGACCG GCGTCAGCGC TGGACCGGGT GGAACCTGGC GTGGGCCCGG
TGGGCCGACG AGCCGTGGGG CGCGGGCCGG TGCCGGTGGT GA
|
|---|
| Protein sequence | MPEEPEPSAG GKPRNTPPGK PEPTAVTTVE PSPGKHFTPG APPRRPLTPE DGARRAKAVL
AALTAAVVAA VVVPHETHGV GWPIAAVVVL ALVGRRVRVG WAALSVLLAS VAAFRASGWL
FALCLVTGLV TASLAVTGGR TVRGLLWGSF AVPATSLVAL PWGASGVAAH RAGGWVRPVV
LTCVVLLVFL PLLASADEAF ADLVLSVLSQ PGAPAPVTAF FGAAAGAGVL AARRLQALPN
TSDRPLDPAR PVARRDWALP VGALVALFTA FVAVQLRTLF GGDRHVQVTA DLTYADYARG
GFGQLVVVTL LTLGVLGAVS RFASRATGRD RVWLRALPGA LCALTLVIVA SAVHRMWLYQ
RAYGFTEQRV LALAAELWLG LVCLVVLAAG VRLSAAWLPR AVVATAAGAV LALAVANPDL
LVAEANVARY EATGRIDQPY LTTLSVDAAP ALARLPKELR VCHWPDRRQR WTGWNLAWAR
WADEPWGAGR CRW
|
|---|
| |