Gene Amir_6207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6207 
Symbol 
ID8330418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7273237 
End bp7275414 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content71% 
IMG OID644946639 
Producthelicase, RecD/TraA family 
Protein accessionYP_003103858 
Protein GI256380198 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGAGG GTGCTGTGCT GGAAGCCGTG CTCGAGCGGA TCACCTTCGC GAACGAGGAG 
ACCGGGTACA CGGTCGCCCG CGTCGACACC GGGCGTGGCG CGGATCTGAT CACCGTCGTC
GGGGCCCTCC TCGGCGCGCA GCCCGGTGAG TCCATCCGGA TGCGCGGGCG CTGGGGTTCG
CACCCGCAGT ACGGCAAGCA GTTCCACGTC GACGACTACA CCACCGTCCT CCCCGCCACC
ATCCAGGGCA TCCGCCGCTA CCTCGGTTCC GGCCTGATCA AGGGCATCGG CCCCGTGCTC
GCCGACCGGA TCGTCACGCA CTTCGGGGTC GACGCGCTCG ACGTCATCGA GCAGCACCCC
GAGCGCCTCG TCGAGGTGCC CAAGCTCGGG CCCAAGCGCA CGAAGATGAT CGCCGCCGCG
TGGGAGGAGC AGAAGGCCAT CAAGGAGGTC ATGGTCTTCC TCCAGGGGGT CGGGGTCTCG
ACCTCCCTCG CGGTGCGCAT CTACAAGCAG TACGCCGACC GCTCGATCGA CGTGGTCCGC
GAAGAGCCCT ACCGGCTCGC CACCGACGTG TGGGGCATCG GGTTCCGCAC CGCCGACGTC
ATCGCCAAGG CCGTCGGCAT CCCCCACGAC AGCCCCCAGC GCATCAAGGC CGGCCTCCAG
TTCACGCTCT CCGAGGCCAC CGGCGGCGGC AACTGCTTCC TGCCCGAGAA CGAGCTCATC
GGCGACGCCA TCCGCATCCT CCAGGTCGAC GCGGGCCTGG TCATCGACTG CCTCGCCGAG
CTCGTCGACG AGGAGGGGGT GGTCCGCGAG ATCCAGCCGG ACGGCGAGGC CGCCGTCTAC
CTGATCCCCT TCCACCGCGC CGAGATCTCA CTGGCCACCC AGCTGCGCCG ACTCCTCGCC
ACCGACGACG ACCGGCTGCC CGCGTTCGCC TCCGTGGACT GGACCAAGGC CCTCCGCTGG
CTCGGCGCCG AGCTGGAGGG CAAGCAGGAG GCCGCCGTGC GCCTCGCGCT CACCAACAAG
GTCGCCGTGC TCACCGGTGG ACCCGGCTGC GGCAAGAGCT TCACCGTGCG CTCGATCGTC
CGCCTCGCCC TGGCCAAGGG CGCGAAGGTC GTGCTCGCCG CCCCGACGGG ACGCGCCGCG
AAGCGGCTGG CCGAGCTGAC CGGCCACGCG GCGTCCACCG TGCACCGCCT GCTGGAGCTC
AAGCCCGGCG GTGACGCCGC CTACGACCGC GACCGGCCGC TCGACGCGGA CCTGGTCGTC
GTGGACGAGG CGTCCATGCT GGACCTGCTG CTCGCCAACA AGCTCGTCAA GGCCGTCCCT
CCCGGCGCGC ACCTGCTGCT GGTCGGCGAC GTCGACCAGC TGCCCTCGGT GGGCGCGGGC
GAGGTGCTGC GGGACGTGCT GGCCACCGGC AGCCCGGTGC CGAACGTGCG CCTCACGCAC
GTGTTCCGCC AGGCCCAGCA GTCCGGCGTG GTCACCAACG CGCACCGCAT CAACGCGGGC
GAACCCCCGG TGGTGCAGGG GCTGGCGGAC TTCTTCCTGT TCCCGGTCGA GGACGCCGAG
GAGGCGGCCG AGGTGACCGT GGACGTGGTC GCGCGCCGCA TCCCGCGCAA GTTCGGCCTC
GACCCGCGCA AGGACGTGCA GGTCCTCGCG CCCATGCACC GGGGCGCGGC GGGCGCGGGC
GGGCTCAACG CCGTGCTGCA GGAGGCGCTG ACCCCCGCGC GCGAGGGCCT GCCGGAGCGC
AGGTTCGGCG GGCGGGTGTT CCGGGTCGGG GACAAGGTCA CCCAGATCCG CAACAACTAC
GACAAGGGCG CGAACGGGGT CTTCAACGGC ACGCTCGGGG TGGTCACCGG GATCGACTCG
GTGGAGCAGA GGGTGACGGT CCGGACCGAT GAGGACGAGG ACGTGGATTA TGAGTTCGGC
GAGCTGGACG AGTTGACCCA CGCCTACGCC ATGACGATTC ACCGTTCACA GGGCAGTGAG
TACCCGTGCG TGGTCATCCC AATCACCACG AGTGCCTGGA TGATGCTCCA GCGGAACCTG
CTCTACACGG CGGTGACCCG CGCGAAGAAG CTCGTGGTGC TGGTCGGCTC GCGCAAGGCG
ATCGGGCAGG CGGTGCGCAC GGTGGGCGCC GGGCGCCGCC ACACCGCGCT CGACCACCGG
CTCACCGGCA CGCTCTGA
 
Protein sequence
MAEGAVLEAV LERITFANEE TGYTVARVDT GRGADLITVV GALLGAQPGE SIRMRGRWGS 
HPQYGKQFHV DDYTTVLPAT IQGIRRYLGS GLIKGIGPVL ADRIVTHFGV DALDVIEQHP
ERLVEVPKLG PKRTKMIAAA WEEQKAIKEV MVFLQGVGVS TSLAVRIYKQ YADRSIDVVR
EEPYRLATDV WGIGFRTADV IAKAVGIPHD SPQRIKAGLQ FTLSEATGGG NCFLPENELI
GDAIRILQVD AGLVIDCLAE LVDEEGVVRE IQPDGEAAVY LIPFHRAEIS LATQLRRLLA
TDDDRLPAFA SVDWTKALRW LGAELEGKQE AAVRLALTNK VAVLTGGPGC GKSFTVRSIV
RLALAKGAKV VLAAPTGRAA KRLAELTGHA ASTVHRLLEL KPGGDAAYDR DRPLDADLVV
VDEASMLDLL LANKLVKAVP PGAHLLLVGD VDQLPSVGAG EVLRDVLATG SPVPNVRLTH
VFRQAQQSGV VTNAHRINAG EPPVVQGLAD FFLFPVEDAE EAAEVTVDVV ARRIPRKFGL
DPRKDVQVLA PMHRGAAGAG GLNAVLQEAL TPAREGLPER RFGGRVFRVG DKVTQIRNNY
DKGANGVFNG TLGVVTGIDS VEQRVTVRTD EDEDVDYEFG ELDELTHAYA MTIHRSQGSE
YPCVVIPITT SAWMMLQRNL LYTAVTRAKK LVVLVGSRKA IGQAVRTVGA GRRHTALDHR
LTGTL