Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6207 |
Symbol | |
ID | 8330418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7273237 |
End bp | 7275414 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644946639 |
Product | helicase, RecD/TraA family |
Protein accession | YP_003103858 |
Protein GI | 256380198 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGAGG GTGCTGTGCT GGAAGCCGTG CTCGAGCGGA TCACCTTCGC GAACGAGGAG ACCGGGTACA CGGTCGCCCG CGTCGACACC GGGCGTGGCG CGGATCTGAT CACCGTCGTC GGGGCCCTCC TCGGCGCGCA GCCCGGTGAG TCCATCCGGA TGCGCGGGCG CTGGGGTTCG CACCCGCAGT ACGGCAAGCA GTTCCACGTC GACGACTACA CCACCGTCCT CCCCGCCACC ATCCAGGGCA TCCGCCGCTA CCTCGGTTCC GGCCTGATCA AGGGCATCGG CCCCGTGCTC GCCGACCGGA TCGTCACGCA CTTCGGGGTC GACGCGCTCG ACGTCATCGA GCAGCACCCC GAGCGCCTCG TCGAGGTGCC CAAGCTCGGG CCCAAGCGCA CGAAGATGAT CGCCGCCGCG TGGGAGGAGC AGAAGGCCAT CAAGGAGGTC ATGGTCTTCC TCCAGGGGGT CGGGGTCTCG ACCTCCCTCG CGGTGCGCAT CTACAAGCAG TACGCCGACC GCTCGATCGA CGTGGTCCGC GAAGAGCCCT ACCGGCTCGC CACCGACGTG TGGGGCATCG GGTTCCGCAC CGCCGACGTC ATCGCCAAGG CCGTCGGCAT CCCCCACGAC AGCCCCCAGC GCATCAAGGC CGGCCTCCAG TTCACGCTCT CCGAGGCCAC CGGCGGCGGC AACTGCTTCC TGCCCGAGAA CGAGCTCATC GGCGACGCCA TCCGCATCCT CCAGGTCGAC GCGGGCCTGG TCATCGACTG CCTCGCCGAG CTCGTCGACG AGGAGGGGGT GGTCCGCGAG ATCCAGCCGG ACGGCGAGGC CGCCGTCTAC CTGATCCCCT TCCACCGCGC CGAGATCTCA CTGGCCACCC AGCTGCGCCG ACTCCTCGCC ACCGACGACG ACCGGCTGCC CGCGTTCGCC TCCGTGGACT GGACCAAGGC CCTCCGCTGG CTCGGCGCCG AGCTGGAGGG CAAGCAGGAG GCCGCCGTGC GCCTCGCGCT CACCAACAAG GTCGCCGTGC TCACCGGTGG ACCCGGCTGC GGCAAGAGCT TCACCGTGCG CTCGATCGTC CGCCTCGCCC TGGCCAAGGG CGCGAAGGTC GTGCTCGCCG CCCCGACGGG ACGCGCCGCG AAGCGGCTGG CCGAGCTGAC CGGCCACGCG GCGTCCACCG TGCACCGCCT GCTGGAGCTC AAGCCCGGCG GTGACGCCGC CTACGACCGC GACCGGCCGC TCGACGCGGA CCTGGTCGTC GTGGACGAGG CGTCCATGCT GGACCTGCTG CTCGCCAACA AGCTCGTCAA GGCCGTCCCT CCCGGCGCGC ACCTGCTGCT GGTCGGCGAC GTCGACCAGC TGCCCTCGGT GGGCGCGGGC GAGGTGCTGC GGGACGTGCT GGCCACCGGC AGCCCGGTGC CGAACGTGCG CCTCACGCAC GTGTTCCGCC AGGCCCAGCA GTCCGGCGTG GTCACCAACG CGCACCGCAT CAACGCGGGC GAACCCCCGG TGGTGCAGGG GCTGGCGGAC TTCTTCCTGT TCCCGGTCGA GGACGCCGAG GAGGCGGCCG AGGTGACCGT GGACGTGGTC GCGCGCCGCA TCCCGCGCAA GTTCGGCCTC GACCCGCGCA AGGACGTGCA GGTCCTCGCG CCCATGCACC GGGGCGCGGC GGGCGCGGGC GGGCTCAACG CCGTGCTGCA GGAGGCGCTG ACCCCCGCGC GCGAGGGCCT GCCGGAGCGC AGGTTCGGCG GGCGGGTGTT CCGGGTCGGG GACAAGGTCA CCCAGATCCG CAACAACTAC GACAAGGGCG CGAACGGGGT CTTCAACGGC ACGCTCGGGG TGGTCACCGG GATCGACTCG GTGGAGCAGA GGGTGACGGT CCGGACCGAT GAGGACGAGG ACGTGGATTA TGAGTTCGGC GAGCTGGACG AGTTGACCCA CGCCTACGCC ATGACGATTC ACCGTTCACA GGGCAGTGAG TACCCGTGCG TGGTCATCCC AATCACCACG AGTGCCTGGA TGATGCTCCA GCGGAACCTG CTCTACACGG CGGTGACCCG CGCGAAGAAG CTCGTGGTGC TGGTCGGCTC GCGCAAGGCG ATCGGGCAGG CGGTGCGCAC GGTGGGCGCC GGGCGCCGCC ACACCGCGCT CGACCACCGG CTCACCGGCA CGCTCTGA
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Protein sequence | MAEGAVLEAV LERITFANEE TGYTVARVDT GRGADLITVV GALLGAQPGE SIRMRGRWGS HPQYGKQFHV DDYTTVLPAT IQGIRRYLGS GLIKGIGPVL ADRIVTHFGV DALDVIEQHP ERLVEVPKLG PKRTKMIAAA WEEQKAIKEV MVFLQGVGVS TSLAVRIYKQ YADRSIDVVR EEPYRLATDV WGIGFRTADV IAKAVGIPHD SPQRIKAGLQ FTLSEATGGG NCFLPENELI GDAIRILQVD AGLVIDCLAE LVDEEGVVRE IQPDGEAAVY LIPFHRAEIS LATQLRRLLA TDDDRLPAFA SVDWTKALRW LGAELEGKQE AAVRLALTNK VAVLTGGPGC GKSFTVRSIV RLALAKGAKV VLAAPTGRAA KRLAELTGHA ASTVHRLLEL KPGGDAAYDR DRPLDADLVV VDEASMLDLL LANKLVKAVP PGAHLLLVGD VDQLPSVGAG EVLRDVLATG SPVPNVRLTH VFRQAQQSGV VTNAHRINAG EPPVVQGLAD FFLFPVEDAE EAAEVTVDVV ARRIPRKFGL DPRKDVQVLA PMHRGAAGAG GLNAVLQEAL TPAREGLPER RFGGRVFRVG DKVTQIRNNY DKGANGVFNG TLGVVTGIDS VEQRVTVRTD EDEDVDYEFG ELDELTHAYA MTIHRSQGSE YPCVVIPITT SAWMMLQRNL LYTAVTRAKK LVVLVGSRKA IGQAVRTVGA GRRHTALDHR LTGTL
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