Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6204 |
Symbol | |
ID | 8330415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7268752 |
End bp | 7269804 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946636 |
Product | ROK family protein |
Protein accession | YP_003103855 |
Protein GI | 256380195 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0270912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGAACT TGCGCTTCCT GCGCGGCTAC AACGACGCGG TCGTGCTCGG ACTGGCCAGG TCCGGCGCGA TGACCAGGGT CGAGCTGGCC GAGCGCAGCG GCCTCACCCC GCAGGCCGTC TCCAAGATCG TCAACCGGCT CATCGGCGAC GGCCTCCTGC TGGAGTCCGG CACCCGCAAC GTCGGCGTCG GCAAGCCCCG CACCCTCCTC AAGCTCGCCG CCGACCGCAG GCTCGCCCTC GGCGCCCAGG TCGAGCGGGA CGAGCTGCGG GTCGTGCTCG CCGACCTCGC GGGCGACGTG GTCGGCCGCG CCGTCGCCCC GCTGCCGCCA GGGTTCGGGC CCGACGCGTT CGTCGCCGAG CTGGCCGCGC TCGCCGACCG GCTGCGCACC CCCGACGTGG AGGAGCGCCT GCTGGGCCTG GGGATCGGGT TCGTCGGGCC GCTTGACCAC CGCACCGGCA CCGTGCTCGA CCCGAACGGC CTGGCGGGGT GGACCGAGGT GCCGCTGCGC GACCTGGCCG AGAAGCGCCT CGGGCTGCCG GTGGTGGTGG ACAAGGACAC CAACGCGGCG ATCGTGGCCG AGTCCTGGCG GCGCGGCGAG GAGCTGCGCG ACGCGGTGCT GGTGTGGGTC GGCACCGGGC TCGGCGCGGG GCTGCTGCTC GACGGGCGGG TGCACCGGGG CGCGCGGACC AACGCGGGCG AGTTCGGGCA CACCTCGATC CGGCTGGACG GGCCGCCGTG CGTGTGCGGG CGGGCCGGGT GCGCCGAGGC GGTGCACAAC GCGGCGGCCA CGCGCGGTGA CCTCGGGGCG GCCACCACGG CGGTCGGGGT GGCGGTCGCC GGGCTCGTCC AGGTGCTCGA CGTGGAGCGC GTGGTGCTCG CCGGTCGCGC CGTCCTCGCC CAGCCCGAAG CGTATGCGGA GGGTGTTCGT TACCACCTGC CGAAACACGA TTGGCTGGTC GTCGATGTCG AAGTGACCCC GTTGGGTGAC GACTTGGTTG CTGCGGGTGC TGCGATGCTG GTTCTGAGCG AGTTCTACGG ACGTCCGCGC TGA
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Protein sequence | MPNLRFLRGY NDAVVLGLAR SGAMTRVELA ERSGLTPQAV SKIVNRLIGD GLLLESGTRN VGVGKPRTLL KLAADRRLAL GAQVERDELR VVLADLAGDV VGRAVAPLPP GFGPDAFVAE LAALADRLRT PDVEERLLGL GIGFVGPLDH RTGTVLDPNG LAGWTEVPLR DLAEKRLGLP VVVDKDTNAA IVAESWRRGE ELRDAVLVWV GTGLGAGLLL DGRVHRGART NAGEFGHTSI RLDGPPCVCG RAGCAEAVHN AAATRGDLGA ATTAVGVAVA GLVQVLDVER VVLAGRAVLA QPEAYAEGVR YHLPKHDWLV VDVEVTPLGD DLVAAGAAML VLSEFYGRPR
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