Gene Amir_6204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6204 
Symbol 
ID8330415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7268752 
End bp7269804 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content74% 
IMG OID644946636 
ProductROK family protein 
Protein accessionYP_003103855 
Protein GI256380195 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0270912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAACT TGCGCTTCCT GCGCGGCTAC AACGACGCGG TCGTGCTCGG ACTGGCCAGG 
TCCGGCGCGA TGACCAGGGT CGAGCTGGCC GAGCGCAGCG GCCTCACCCC GCAGGCCGTC
TCCAAGATCG TCAACCGGCT CATCGGCGAC GGCCTCCTGC TGGAGTCCGG CACCCGCAAC
GTCGGCGTCG GCAAGCCCCG CACCCTCCTC AAGCTCGCCG CCGACCGCAG GCTCGCCCTC
GGCGCCCAGG TCGAGCGGGA CGAGCTGCGG GTCGTGCTCG CCGACCTCGC GGGCGACGTG
GTCGGCCGCG CCGTCGCCCC GCTGCCGCCA GGGTTCGGGC CCGACGCGTT CGTCGCCGAG
CTGGCCGCGC TCGCCGACCG GCTGCGCACC CCCGACGTGG AGGAGCGCCT GCTGGGCCTG
GGGATCGGGT TCGTCGGGCC GCTTGACCAC CGCACCGGCA CCGTGCTCGA CCCGAACGGC
CTGGCGGGGT GGACCGAGGT GCCGCTGCGC GACCTGGCCG AGAAGCGCCT CGGGCTGCCG
GTGGTGGTGG ACAAGGACAC CAACGCGGCG ATCGTGGCCG AGTCCTGGCG GCGCGGCGAG
GAGCTGCGCG ACGCGGTGCT GGTGTGGGTC GGCACCGGGC TCGGCGCGGG GCTGCTGCTC
GACGGGCGGG TGCACCGGGG CGCGCGGACC AACGCGGGCG AGTTCGGGCA CACCTCGATC
CGGCTGGACG GGCCGCCGTG CGTGTGCGGG CGGGCCGGGT GCGCCGAGGC GGTGCACAAC
GCGGCGGCCA CGCGCGGTGA CCTCGGGGCG GCCACCACGG CGGTCGGGGT GGCGGTCGCC
GGGCTCGTCC AGGTGCTCGA CGTGGAGCGC GTGGTGCTCG CCGGTCGCGC CGTCCTCGCC
CAGCCCGAAG CGTATGCGGA GGGTGTTCGT TACCACCTGC CGAAACACGA TTGGCTGGTC
GTCGATGTCG AAGTGACCCC GTTGGGTGAC GACTTGGTTG CTGCGGGTGC TGCGATGCTG
GTTCTGAGCG AGTTCTACGG ACGTCCGCGC TGA
 
Protein sequence
MPNLRFLRGY NDAVVLGLAR SGAMTRVELA ERSGLTPQAV SKIVNRLIGD GLLLESGTRN 
VGVGKPRTLL KLAADRRLAL GAQVERDELR VVLADLAGDV VGRAVAPLPP GFGPDAFVAE
LAALADRLRT PDVEERLLGL GIGFVGPLDH RTGTVLDPNG LAGWTEVPLR DLAEKRLGLP
VVVDKDTNAA IVAESWRRGE ELRDAVLVWV GTGLGAGLLL DGRVHRGART NAGEFGHTSI
RLDGPPCVCG RAGCAEAVHN AAATRGDLGA ATTAVGVAVA GLVQVLDVER VVLAGRAVLA
QPEAYAEGVR YHLPKHDWLV VDVEVTPLGD DLVAAGAAML VLSEFYGRPR