| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6203 |
|---|
| Symbol | |
|---|
| ID | 8330414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7267989 |
|---|
| End bp | 7268708 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644946635 |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_003103854 |
|---|
| Protein GI | 256380194 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00400248 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCGC TCCGCTACGC CGTCGGCACC GACACCGGTC AGCGCCGTGA GGCCAACGAA
GACTCGGTGC ACTGCGGCGA GCGCCTGTTC GCCGTCGCGG ACGGCATGGG CGGCCACGCC
TTCGGCGAGG TGGCCAGTTC GATCGCGGTC GCGGTGCTCG CCGACGTGGA CGTCGACGCC
GACGACCCGC TGACCGAGCT GGCGGCGGCC ACCCGCGAGA TCGCGGTGCG GCTGACCGAC
CTGGCCGAGG AGAACTTCGA CATGCGCGGC ATGGGGACCA CCCTCACCGC GCTGCTGTGG
GACGGCGAGG AGAAGCGCTT CGCGGTGTGC CACATCGGCG ACTCGCGCGC CTACCTGTCG
CGCGGCGGGG AGCTGACCCA GATCACCAGG GACCACACCG TGGTGCAGGC GATGGTCGAC
GACGGCCGCA TGGCCGCCGA GCAGGCCGCC GCCCACCCCG GCCGGTCCAT GCTGATGCGG
GCGCTGCAGG CGGGGAGCGC GCACGACGCC GACCTGTTCT TCCACGAGGT GCAGCCCGGC
GACCGGTACC TGATCTGCTC GGACGGCCTG AGCGACGTGG TCGCCGCCGG GGAGATCGGC
AGGCTGCTGA CGGCGGACGA GGACCGGGAC GCGGTCATCG CGTCGCTGAT CGCCGCCGCG
AACGGCGAGG GCGGGCCGGA CAACATCACC TGCATCGTGG TGGACGTCGA AGGCGCGTAG
|
|---|
| Protein sequence | MYALRYAVGT DTGQRREANE DSVHCGERLF AVADGMGGHA FGEVASSIAV AVLADVDVDA
DDPLTELAAA TREIAVRLTD LAEENFDMRG MGTTLTALLW DGEEKRFAVC HIGDSRAYLS
RGGELTQITR DHTVVQAMVD DGRMAAEQAA AHPGRSMLMR ALQAGSAHDA DLFFHEVQPG
DRYLICSDGL SDVVAAGEIG RLLTADEDRD AVIASLIAAA NGEGGPDNIT CIVVDVEGA
|
|---|
| |