Gene Amir_6201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6201 
Symbol 
ID8330412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7266202 
End bp7266771 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content78% 
IMG OID644946633 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103852 
Protein GI256380192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0829103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGAGG TCGGCGGGCG GCGGCTGCGG GCCGACGCGC AGCGGAACGT GGACCGGATC 
GTGGCCGCCG CGCAGGAGGT CTTCCGGCGG GACGGGGCAG GGGCGTCGCT GGAGGAGATC 
GCGCGGCGGG CCGGGGTCGG GTCGGCGACG CTGCACCGGC ACTTCCCCGG CAGGCAGGCG 
CTCCTGGAGT CGGTGTTCCG CGACCGGCTG GAGGCGCTGT GCGCGCGGGC CGACGAGCAC 
GCGGCCGGGC TCGCGCCGGG GGACGCGCTG CTCGCGTGGC TGCGGGACTT CGTGGAGTAC 
GCGTCCACGA GCCGGGGGCT GGTCGCCGCG CTGCTGCCCG AACCCGAGGA CTGCGGGCGG 
CAGGACGGCT GCGGCGGGCG GATCACCTCG GCGCTGGAGG GGCTGCTGCG GCGGGCGCGG 
GAGGCCGGGG CGGTGCGGGA CGGGGTGCGG GGGGACGACG TGCTGGCGAT GGTGAACGGG 
ATCTCGCTGG TGACCGAGCT GCGCGGGGAC GACGGGCAGG CCGAGCGGCT GCTGGACCTG 
GCGATCGACG GGATGCGCGG CGGGCGGTGA
 
Protein sequence
MAEVGGRRLR ADAQRNVDRI VAAAQEVFRR DGAGASLEEI ARRAGVGSAT LHRHFPGRQA 
LLESVFRDRL EALCARADEH AAGLAPGDAL LAWLRDFVEY ASTSRGLVAA LLPEPEDCGR 
QDGCGGRITS ALEGLLRRAR EAGAVRDGVR GDDVLAMVNG ISLVTELRGD DGQAERLLDL 
AIDGMRGGR