Gene Amir_6197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6197 
Symbol 
ID8330408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7262316 
End bp7263008 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content79% 
IMG OID644946629 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003103848 
Protein GI256380188 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCGC TGGTCGACTC GCACGACGTG CTCACCCTCC GGCCGGGCAC GGGGGTGCTC 
CTCCCGGACC CGGCGGTCAC CGTGGTGCTG TGCACGGTCA CCCGCGAGCC GTTCGTGCTC 
GGCCCCCGCA CCACCGCCAC CTACTTCGCG GGCAGCTCCG CCGTCCGGCA CGTGCTGCGG 
CTGACCCCGG CGGCGGCTGC CGTCCTCGGC CTCCCGGCGG CCGACCTGGT GAACGGCTCG 
ACCCCGCTGC GCGCGCTGTG GGGCGACGCC GCCGCGGACG CCGTCGCCGC CGACCCCGTG 
GCGTTCGCCG CGCTGGCCCG CGAGCGCGGG GTGGTCCGCG CCGAACCCCG CCACGCCGCG 
CTGGTGACCG CCGCGACGGC CCAGCTGCGC CACCGCACCG TCGCGGACGC CGCGAAGGCG 
CTGCACCTGG GGGAGCGGCG ACTGCGGGAC GTGTTCACCG CCGCGACCGG CCTGCCGCCC 
AAGCGGTACG CGGTGCTGGA CCGGGTCCGC CGGGCGGCGC TGGAGCGCGA CGGCGACCGC 
ACCTGGGCCG CGCGGGCCGC CGACCTCGGC TACCACGACC AGGCGCACCT GGCCGCCGAC 
TTCCGCGCGG TCTTCCGCAT CCCGCCCAGC GCCTTCGCGG CGGCCAGGTT CCCCGAACCG 
ACCACCTGCC GCCCACCCGC AGACCCGCGC TGA
 
Protein sequence
MRPLVDSHDV LTLRPGTGVL LPDPAVTVVL CTVTREPFVL GPRTTATYFA GSSAVRHVLR 
LTPAAAAVLG LPAADLVNGS TPLRALWGDA AADAVAADPV AFAALARERG VVRAEPRHAA 
LVTAATAQLR HRTVADAAKA LHLGERRLRD VFTAATGLPP KRYAVLDRVR RAALERDGDR 
TWAARAADLG YHDQAHLAAD FRAVFRIPPS AFAAARFPEP TTCRPPADPR