Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6189 |
Symbol | |
ID | 8330400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7254148 |
End bp | 7255356 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644946621 |
Product | ROK family protein |
Protein accession | YP_003103840 |
Protein GI | 256380180 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.171626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAC CTGGGCGGGC CACACCGCAC GCGAGCAGCA AGGCGACCGT CCTGGACGTG ATCAGGGCGG CGGGCGTGAT CAGCCGGGTC GGGCTGATCG GGGCGACCGG GTTCACCGGG GCGACCATCT CCACGGTGGT CCGCAGGCTC ATCGACGAGG GGCTCGTCGT GGAGACCGGG CGGGCCGAGT CCACCGGCGG CAAGCGGCGG GTGCTGCTCC AGCTGAACCA CTCGGCGCGG TACGCGGTCG GCGTGCACCT GGACCACGCG GGCAACACGT ACGTGCTCAC CAACCTCGGC GGCGCGGTCG TGGCGCGCAT CCTGCGACCG GGCGTCGCGG ACCCGGCCGC CGTGGTCGGG CAGGTCGCGG ACTCGGTGTC GGCGCTGGTG GAGGGCGTGG GGATCGAGCG GGAGCTGGTG CTCGGGGTCG GCGTGGTGTC GCCGGGCGCG CCGGGAGCGG ACGTCGAGGG CCTGGTGGGC GAGCTGCGGC GCGCGGTCGG GCTGCCGGTG GCGGCGGACA ACGACGCGAC GGCCGCCGCG CTGGGCGAGC ACTGGTCGGG CGGGATCGGC GGGACGGCGA CGTCGGCGGC GCTGTGCATG GGCACGCGGC TCGGGGCCGG GCTGGTGATC GGCGGGATCA CCTACCGGGG CAACGGCGGC GACGCGGGCG AGATCGGGCA CGTGAGCGTG GACGCGCTGG GACCGGTGTG CTGGTGCGGC GGGCGCGGGT GCCTGGAGGT CATGGCGGGG CCCGCGGCGG TGGTGGCGGA GGCCGGTGAG GCGCCGTCGC TGGCGCGGGA GCTCAAGGGC GGGTCGGTGG CGGCGGACTT CGCGGCCGTG GCGCGCGCGG CCCGGCGGGG CGAGGCGGCG GCGCTGGGGC TGCTGGAGCG GTCGGCGCGG TGCGTGGCGG TGGCGGCGCG GTCGCTGGCG AACCTGATGG ACCTGGAGGT GCTGGTGCTG ACCGGGCCGG GGTTCGCGGT CGCGGGGTCG GTGTACCTGC CGGTGATCCG GGAGGAGCTG GGGCGGGCGG TGGTGGGGCG CGGGAGCGGC GGGGTGGACG TGCGGCTGTC GCGCTCGGCG TCGACCGCGC CCGCGATCGG CGCTGCGGCG CTGGTGCTCC AGGCGGAGCT GGTGCCGCTG ACGCAGGGGT TGCGGTTGCC GGAGAACCTG GCGGCGGCGG AGCCTGCGGC GCTGGCGCCG GGGGTGTGA
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Protein sequence | MSGPGRATPH ASSKATVLDV IRAAGVISRV GLIGATGFTG ATISTVVRRL IDEGLVVETG RAESTGGKRR VLLQLNHSAR YAVGVHLDHA GNTYVLTNLG GAVVARILRP GVADPAAVVG QVADSVSALV EGVGIERELV LGVGVVSPGA PGADVEGLVG ELRRAVGLPV AADNDATAAA LGEHWSGGIG GTATSAALCM GTRLGAGLVI GGITYRGNGG DAGEIGHVSV DALGPVCWCG GRGCLEVMAG PAAVVAEAGE APSLARELKG GSVAADFAAV ARAARRGEAA ALGLLERSAR CVAVAARSLA NLMDLEVLVL TGPGFAVAGS VYLPVIREEL GRAVVGRGSG GVDVRLSRSA STAPAIGAAA LVLQAELVPL TQGLRLPENL AAAEPAALAP GV
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