Gene Amir_6187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6187 
Symbol 
ID8330398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7251294 
End bp7252283 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID644946619 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003103838 
Protein GI256380178 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.871135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTACT ACGCGCGGAA GCTCGGGTTC TACCTGGTCG CCCTCTGGGC GGCGCTCACG 
CTGAACTTCT TCATCCCCCG GCTCATGCCG GGCAACCCCG TCGACACCCT CATGGCCAAG 
CTCGCCCAGC GCGGCGGCCA GGTCGACGCC GAGGCCCGCC GCGCCTACGC GCTGCTGCTC 
GGCGGCGACA GCGAGGGAAC CCTGCTGGAG CAGTACTTCG CGTACCTGGG CAACCTGGCG 
CGCGGCGACC TGGGCGTGTC CGTCAGCGCG TTCCCCACGC CCGTGTCGGA GGTGATCTCC 
GGCGCGCTGC CGTGGACGGT CGTGCTGGTC GGCGTGGCCA CGGTGCTGTC GTTCCTGCTC 
GGCATCGGGC TGGGCGCGTT CGTCGGCTGG CGGCGCGGCA CGTGGCTGGA CTCGCTCGTC 
CCGGCCACCA CGCTGCTCGC GGCCGTGCCG TACTTCTGGC TCGCGCTGAT CCTGGTGGCG 
CTGCTGGCGT CCGGCCTCGG CTGGTTCCCG CTCATCGGCG GGTACGACGT CGTGCTCGAC 
ACCGGCTGGA ACGCCGAGTT CATCGGCTCG GCGGTCTACC ACGGCACGCT GCCCGCCCTG 
ACCATCGTGC TGTCCTCGAT CGGCGGCTGG CTGCTGGGGA TGCGCAACAT GATGGTCTCC 
ACCACCGCCG AGGACTACGT GCTCACCGCG CAGGCCAAGG GGCTCAGGGG ATCGCGGGTC 
ATGGTCCGCT ACGCCGCGCG CAACGCGGTG CTGCCGTCGT TCGCCGCGTT CGCCATCTCG 
CTGGGCTTCG TGGTGTCCGG CTCGATCATC ACCGAGCAGG TGTTCTCCTA CCCCGGCATC 
GGCTCCAAGC TGCTGCAGGC GGTGCAGAAC AACGACTACG CCCTCATGCA GGGCATCTTC 
CTGGTCATCA CGATCGCCGT GCTCGGCGCG AACCTCGTGG TGGACCTGCT CTACGCCGTC 
GTCGACCCGC GCACCCGCGC CCAGGGCTGA
 
Protein sequence
MRYYARKLGF YLVALWAALT LNFFIPRLMP GNPVDTLMAK LAQRGGQVDA EARRAYALLL 
GGDSEGTLLE QYFAYLGNLA RGDLGVSVSA FPTPVSEVIS GALPWTVVLV GVATVLSFLL 
GIGLGAFVGW RRGTWLDSLV PATTLLAAVP YFWLALILVA LLASGLGWFP LIGGYDVVLD 
TGWNAEFIGS AVYHGTLPAL TIVLSSIGGW LLGMRNMMVS TTAEDYVLTA QAKGLRGSRV 
MVRYAARNAV LPSFAAFAIS LGFVVSGSII TEQVFSYPGI GSKLLQAVQN NDYALMQGIF 
LVITIAVLGA NLVVDLLYAV VDPRTRAQG