| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6181 |
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| Symbol | |
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| ID | 8330392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7245381 |
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| End bp | 7247504 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946615 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003103834 |
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| Protein GI | 256380174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.935371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGACC TGAGGCACCT GCGCGCCGCG GGCGTGAGCC TGGTGCTCGA CCTGACCGGA
GGGACCCTCC CCCGCGTGCT GCACTGGGGC GCGGACCTGG GGCCCGACCC CGACCTGGAG
TCGCTGCGGC TGCTGTCGCT GCGCCAGCCC ATCGGCAACT CGGTGGACGG GCACGTGGAG
GTGTCCGTGC TGCCCGAGCA GTCGGCGGGC TGGCTCGGCA CCCCCGGCCT CGTCGGGCAC
CGGGAGGGCG CGGACTTCTC GGTGGCGCTC CGGGTGACCG GGGTGGAGGG CTCCGGGGAC
GGCGTGGTCG TGCGCGCCGT CGACGAGACC GCCGGGCTGG GCGCGGAGGT GCTCGTCGAA
CTGCTGCCGT CCGGCGTGGT GCGGCAGCGC GCGCGGGTGA CGAACACCGG CGACTCGGTG
TTCACCGTGG ACGCGCTGAA CCTGGCGCTG CCGGTGCCCG CCGAGGCGGT GGAGCTGCTC
GACTTCAGCG GCCACCACCT GCGCGAGCGG GCCCCGCAGC GGACCCGGTT CACCCAGGGC
CTGCGGGTGC GGGAGAACCG GACCGGGCGC ACCGGCTACG ACACGGCGTA CGTGCTGGCG
GCGGGCACCG AGGGCTTCGC GAACCGGCGC GGCGAGGTGT GGGCGGTGCA CACGGCCTGG
TCGGGCAACC ACCGGACGTT CGCCGAGCGC ACGTTCCACG CGGTGTCCCT GCTCGGGTCC
GGCGAGCTGC TGCTCGCGGG CGAGGGGCGG CTGGCGCCGG GTGCGGTGTA CGAGTCGCCG
TGGCAGTACG GCTCGTACGG CGCGGCCGGG CTGGACTCGG TGTCGGCGCG GTTCCACGGG
TTCCTGCGCT CGCGCCCCGG CCACCCGACC TCGCCCCGGC CGGTCGTGGT GAACACGTGG
GAGGCGGTGT ACTTCGACCA CGACCTGGAC CGGCTGAAGG CGCTGGCGGA CGCGGCGGCG
GAGGTCGGCG CGGAGCGGTT CGTGCTGGAC GACGGCTGGT TCGGGTCGCG GCGCGACGAC
AAGCGCGGGC TCGGCGACTG GTACGTGTCG GACGAGGTGT GGCCGGACGG GCTCGGGCCG
ATCGTCTCGC ACGTGACCGG GCTGGGGTTG CAGTTCGGGC TGTGGGTCGA GCCGGAGATG
ATCAACGAGG ACTCCGAGCT GGCGCGGGCC CACCCGGACT GGATCATGGC CACCGGCGGG
CGGTTGCCGC GCGCGGCGCG CCAGCAGCAG GTGCTGGACC TGACCAAGGC GTACGACTAC
ATCCTGGAGC GGTTGGACTC GCTGCTGAGC GAGTACGACA TCGCGTACCT CAAGTGGGAC
CACAACCGGG ACCTCGTGGA GGCCGGGCAC CAGCCTGGCG GTCAAGCCGG GGTGCGGGCG
CAGACGCTGG CCGTGTACCG GCTGCTGGAC GAGCTGCGGG CGCGGCACCC CGGGGTGGAG
ATCGAGTCGT GCTCGTCGGG CGGCGGGCGG ATCGACCTGG AGATCCTGCA GCGCACGGAC
CGGGTGTGGA CGTCGGACTG CATCGACGCG CTGGAGCGGC AGCGCATCCA GCGGTGGACG
AACCTGCTGA TCCCGCTGGA GCTGATGGGC TCGCACGTGG GTGACGGGCG CTCGCACACG
ACGGACCGGC TGCACAAGCT GGACTTCCGG GCGGGGACGG CGCTGTTCGG GCACTTCGGG
ATCGAGTCGG ACCTGACGCG GGTGTCGGCG GAGGACCGGG CGCGGTTGAC GGAGTGGGTG
GGGCTGTACA AGTCGCTGCG GGGGCTGCTG CACACCGGGG TGTCGGTGCA CGGGGACCAC
CCGGACCCGG CGATCGAGGT GCACGGGGTC GTGGCGGGCG ATGGGTCGGA CGCGGTGTAC
GCGGTGGTGG CGCACGGGAC GTCGGAGATC TACCCGACGG GGGCGGTGCG GTTGCCGGGG
TTGGCGGCGG ACCGGGAGTA CCACGTGCGG CCGTTGGCGC CGGGGGACGT GCCGGACGGG
AACGCGCACC ACTGGGGGAA CCCCCTGCCT TGGTGGACCC CGGAGGGGGT TCGGGTTGGG
GGGCGGGCGC TGGAGGTCAT GGGGGTGCAG GCTCCGGTGC TCTATCCGGA GCGGTTGGTG
TTGATCCGGG CCACGGCGGT GTGA
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| Protein sequence | MADLRHLRAA GVSLVLDLTG GTLPRVLHWG ADLGPDPDLE SLRLLSLRQP IGNSVDGHVE
VSVLPEQSAG WLGTPGLVGH REGADFSVAL RVTGVEGSGD GVVVRAVDET AGLGAEVLVE
LLPSGVVRQR ARVTNTGDSV FTVDALNLAL PVPAEAVELL DFSGHHLRER APQRTRFTQG
LRVRENRTGR TGYDTAYVLA AGTEGFANRR GEVWAVHTAW SGNHRTFAER TFHAVSLLGS
GELLLAGEGR LAPGAVYESP WQYGSYGAAG LDSVSARFHG FLRSRPGHPT SPRPVVVNTW
EAVYFDHDLD RLKALADAAA EVGAERFVLD DGWFGSRRDD KRGLGDWYVS DEVWPDGLGP
IVSHVTGLGL QFGLWVEPEM INEDSELARA HPDWIMATGG RLPRAARQQQ VLDLTKAYDY
ILERLDSLLS EYDIAYLKWD HNRDLVEAGH QPGGQAGVRA QTLAVYRLLD ELRARHPGVE
IESCSSGGGR IDLEILQRTD RVWTSDCIDA LERQRIQRWT NLLIPLELMG SHVGDGRSHT
TDRLHKLDFR AGTALFGHFG IESDLTRVSA EDRARLTEWV GLYKSLRGLL HTGVSVHGDH
PDPAIEVHGV VAGDGSDAVY AVVAHGTSEI YPTGAVRLPG LAADREYHVR PLAPGDVPDG
NAHHWGNPLP WWTPEGVRVG GRALEVMGVQ APVLYPERLV LIRATAV
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