Gene Amir_6171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6171 
Symbol 
ID8330382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7234196 
End bp7235281 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content74% 
IMG OID644946605 
Producthypothetical protein 
Protein accessionYP_003103824 
Protein GI256380164 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000902678 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGGCG TGCCGGAGGA GCTCCGGGAA GAAGGCGCGT TCCTGCCGTA CCCGTTGTTC 
TCCGAGCCGT CGCTGAGCGG TCCCGCCATG CGCGAGTCCG CGCTGGCCGA GCACAGCCTG
GGCAGGCTCG ACGAGGCGTC GGGCCGCTTC GCCGAGCTGT CCGGCTTCGC GCACGCCACG
AGGGTCCGCG ACGCGTGCGC GTCGGCGGGG ATGGCCGGGT ACCCGGTGGC GCTGCGCGAG
GCGCTGGCGG TGTCCCTGGA CCCGCGTCAC GGCGCCCCGG AGCAGGTGGT CGTGCCCCAC
CTGCTCGGGG TCGAGCTGGG CTTCGCCAAG GTGGCGCAGG GGGCCGACAC CTGGGACCCG
GACCTGCTGG GCGAGGTGGC CGCGGCGCTG ACCGGTCGCG ACCACCGCCC GGACGAGCCG
CTGCGCCGTG GGCAGGGCTG GCTGGGGCCG AGTCGAGAAC GGGCGTGGCT GCTGACGCCG
ACGAGCGCGC ACCTGGTGGG CGCGCTGGCC CAGTGGACGG TGTGGGTGCA GGCGAAGCCC
GCCCTCCCCA GGGTGGCCCG CCTGGCGCTG GCGCACCTGC AACTGGAGCT GCTGCAACCG
TTCGCGGTCC CGGACGGTCA CGTGGCGCGC CTGTTCACCA TGCTGGAGCT GGTGCGCGAG
GGGATGCTGC GCGCCTCGGT GCTGCCCCTG TCGGTGTGGC TGGACCGCGC GGGCGACGAG
TACCGCGAGC AGGTCAGGCA CGTGGTGCGG ACCGGCGAGC ACGGCCCGTG GGTGGAGTTC
TTCGCGCGGG GCGTCCGCGA GCTGGCGGAC GCCCAGGTGA ACCTGCTGGC GAACCTGGAG
TCCCTGGCGG CGGCCTACCG CACCAGGTTC CCCGAGGGCA GCAGGCTGGC CAGGGTGGCC
GCTTCCCTGC TCGGCTTCCC GGCGGTCGAC CACCCGACCC TGCGCGAGGC CGAGGGCCTG
AGCGTGAAAG GCGTGACCCT GCTGACGGAC CGCCTGGTGG CCGAGGGCGT CCTGTACCCC
TGGGAGTCCA GGCGCTACCG CAAGGTCTTC CTCTGCCCCG AAGCCCTAGC CCTCCTCCGC
CCATGA
 
Protein sequence
MVGVPEELRE EGAFLPYPLF SEPSLSGPAM RESALAEHSL GRLDEASGRF AELSGFAHAT 
RVRDACASAG MAGYPVALRE ALAVSLDPRH GAPEQVVVPH LLGVELGFAK VAQGADTWDP
DLLGEVAAAL TGRDHRPDEP LRRGQGWLGP SRERAWLLTP TSAHLVGALA QWTVWVQAKP
ALPRVARLAL AHLQLELLQP FAVPDGHVAR LFTMLELVRE GMLRASVLPL SVWLDRAGDE
YREQVRHVVR TGEHGPWVEF FARGVRELAD AQVNLLANLE SLAAAYRTRF PEGSRLARVA
ASLLGFPAVD HPTLREAEGL SVKGVTLLTD RLVAEGVLYP WESRRYRKVF LCPEALALLR
P