Gene Amir_6163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6163 
Symbol 
ID8330374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7222001 
End bp7223782 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content67% 
IMG OID644946597 
Productprotein of unknown function DUF262 
Protein accessionYP_003103816 
Protein GI256380156 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGTCG AGAGCTTCGG CATCGAGAAG GAGTTCCTGA AGGACCTGCT CACCCAGGTG 
GACAAGGGAG AAGCGCAGCT CCCGGAGTTC CAGCGCGGTT GGGTGTGGCC GGACCGCAAC
ATCGCGAGCC TGATCACCTC CATCTCGCTG GGCTACCCGG CAGGCACCGC GATGATGCTG
AAGCAAGGTG GCGACGTCCG CTTCAAGACC CGGTCGGTCG AGGGCGCGCC GCGCAGCAAC
GTCGTGCCGG ACCGGCTGAT CCTCGACGGG CAGCAGCGGC TGACCTCGCT CTACCAGTCC
CTGTTCCGCG ACGCGCCCGT GGAGACCCAC GACGTCCGCA ACAAGACCGC TCGCGGCTGG
TTCTACCTCG ACATGGAGAA AGCGCTCCTC GGCGACGGCG ATCGCGAGGA AGCCGTGGTC
TTCATCCCGG AGAGCAAGGT GCGCCTGGAC TTCCGCGGTC AGGCCCTGCT GAACCTGTCC
ACGCCTGAGC ACGAGTACGC GCACCGCATG TTCCCCTGCG CCTCGGTGTT CAACTCGATG
CCCTGGATGA TGGGGTTCGT CCAGCACGAG CCGGAGCGGC AGGCCGAGAA CCTGAAGCTG
TGGGGCGAGT TCCACGAGGC CGTGATCAAG AGGTTCGAGC AGTACCAGCT CCCGGTGCTC
GAACTGGGCA AGAGCACTCC CCGGCAGGCG GTGTGCCAGG TCTTCGAGAA GGTCAACACC
GGTGGGGTCA CCCTGACCGT CTTCGAACTG CTGACCGCGA CCTTCGCGGC CGACGACTTC
GACCTGCGGC GCGACTGGAC GGGGCGTGAA GAGCAGTGGG CGGGCAGCCA GTACCGGGTC
CTCTCCGAGG TCGCCAACAC GGACTTCCTC CAGGCGGTGA CCCTGCTCGC CACGTACGAG
CGCCACCAGG CCGCCATCGA GGCGGGCCGG GACGAGCTGG CTGCTCCGCG CATCGGCTGC
CGCCGAGTCG ACATGCTCAA CCTGACCCTG CCGGAGTACC GCAAGTGGGC TCCCGAGGTC
GCGGACGGCC TCAAGTCGGC GGCCCAGTTC CTGTACTCGC AGCACATCTT CGACACCCGG
TTCCTGCCCT ACGGCAGCCA GCTCATCCCG CTGTCGGCGA TCTTCACCCT GCTCGGCCCG
AAGGCGAAGA CGGTCGGCGC GGTGCGGAAG ATCTCCCGCT GGTACTGGTC CGGTGTCTTC
GGCGAGCTCT ACGGCGGCAC GATCGAGACC CGCTTCGCGC GCGACGTGCC CGAGGTCGTC
GCCTGGGTGA CGGGGCAGGG GGACGAACCG CGCACGGTCC AGGAGGCGCA GTTCTTCTCC
AGTCGCCTCA ACTCCCTGCG AACCCGTGGT TCCGCGGCTT ACAAGGGGCT CTACGCGCTG
CTGCTCAAGG AGGCGCCGGT GGACTGGTGC ACCGGTTCCG ACATGTCCAT CGAGAACTAC
TTCGACAACG CCGTCGACAT CCACCACGTG TTTCCCAGGG CCTGGTGCGA GAAGCAGGGG
ATCTCCCAGG CCAGGTACAA CTCCATCCTC AACAAGACCC CGCTGACCGC GCGCACCAAC
CGCCTCATCG GTGGTCGGGC GCCGTCGGCG TACCTGCGGG TGCTGGTCAA CAAGGCGGAG
ACCAGCCCGG AGCAGGTCGA CCGGAACGTG CGTTCGCACC TGATCGCGGT GGCGCACCTG
CACGGTGACG ACTTCACCGC GGCGATGGAG GCCCGACGAC GCGCCCTGCT CGACCTCGTC
GGGCGGGCGA TGGGCAAGGA CGCGCGCATC GACACCGAGT AG
 
Protein sequence
MGVESFGIEK EFLKDLLTQV DKGEAQLPEF QRGWVWPDRN IASLITSISL GYPAGTAMML 
KQGGDVRFKT RSVEGAPRSN VVPDRLILDG QQRLTSLYQS LFRDAPVETH DVRNKTARGW
FYLDMEKALL GDGDREEAVV FIPESKVRLD FRGQALLNLS TPEHEYAHRM FPCASVFNSM
PWMMGFVQHE PERQAENLKL WGEFHEAVIK RFEQYQLPVL ELGKSTPRQA VCQVFEKVNT
GGVTLTVFEL LTATFAADDF DLRRDWTGRE EQWAGSQYRV LSEVANTDFL QAVTLLATYE
RHQAAIEAGR DELAAPRIGC RRVDMLNLTL PEYRKWAPEV ADGLKSAAQF LYSQHIFDTR
FLPYGSQLIP LSAIFTLLGP KAKTVGAVRK ISRWYWSGVF GELYGGTIET RFARDVPEVV
AWVTGQGDEP RTVQEAQFFS SRLNSLRTRG SAAYKGLYAL LLKEAPVDWC TGSDMSIENY
FDNAVDIHHV FPRAWCEKQG ISQARYNSIL NKTPLTARTN RLIGGRAPSA YLRVLVNKAE
TSPEQVDRNV RSHLIAVAHL HGDDFTAAME ARRRALLDLV GRAMGKDARI DTE