| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6153 |
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| Symbol | |
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| ID | 8330363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7205355 |
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| End bp | 7207484 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946586 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003103806 |
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| Protein GI | 256380146 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.874638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACA CCGATGTGCT GAGCAGCGAT TCCGCTGCTC CCAACGCCGC TGCCAGTTCC
GGAGCCGAGG AGAACGCTCT GTCCACCCCT ACGAACGGCG GCGCCCCGGC GCGCAAGCGC
GCGGGACTCT CCGGCATGGT GCTGGCCGAA CTGCGTGAAC TCGCAGGTCA GCTCGGCATC
GACAGCACGG CCAAGCTCCG CAAGGGCGAC CTCATCGCGG CCATCAAGGA GCGGCAGGGC
GGCACCTCCG GTCGGGGCAG TGCCGCGACG CCGCCGAAGG CCGAGAAGCC GAAGGCCGAG
AAGGCCACCG CGAAGCCCGC CGAGGCGCCT GCCCCCGCCG CCGAGAAGGC GGTCGAGAAG
CCGACCCAGC AGCAGCTCGA CGTCCCCGAG CGCGCGGGGG AGGAGGAGAC CGGGCGTCGC
GGCAACCGCC GTCGCCGGTC CGCCAACCGC CCCGCGGGCA GCCCCGAGGC GCCCGTCGCC
GCTGCTGCCC CCGCCGCTCC CGCGCAGGTC GAGGCCCCGC AGCAGGCGGA GCAGCGGCCC
GAGCGCGTCG AGCGTGCCGA GCGCTCCGAC CGGGGTGACC GGGGCGAGCG CTCCGAGCGC
CAGGGCCGGG AGCGGGGCGA GCGCTCCGAC CGGGGTGACC GCTCCGACCG CGGCGAGCGC
GCTGAGCGTT CCGACCGCGG TGAGCGTTCC GACCGCGGTG AGCGTTCGGA CCGCGGTGAG
CGTTCGGACC GCGGTGAGCG TTCGGACCGT GGTGAGCGCG GCGACCGCTC CGAGCGGGGC
GAGCGCGGCG ACCGGAACCG CGACCGTGAC CGCGACCGCG GCGAGCGGGG CGACCGCAAC
CGCGACCGCG ACCGCCAGAG CAACAACGTG CCCGAGGACG ACGGCGACGA CGAGGGCGGC
CGTCGCGGTC GCCGCTTCCG GGACCGCCGC CGCCGTGGCG GCCGGGGCGA GGGCGCAGGC
GTGGGCACCG ACACCGAGGT GCGCGACGAC GACGTCCTGC TGCCCGTCGC GGGCATCCTG
GACGTGCTGG AGAACTACGC CTTCGTGCGC ACCTCCGGCT ACCTCGCGGG CCCGAACGAC
GTCTACGTGT CGCTCTCGCT GGTGCGCAAG CACGGCCTGC GGCGCGGTGA CGCCATCATC
GGCGCCGTCC GCCAGCCGCG CGACGGCGAG CAGCAGCGGC AGAAGTTCAA CCCGCTGGTG
CGCGTCGACA AGATCAACGG GTTGGACCCG GAGGAGTCGC GCAACCGCCC CGACTTCACC
AAGCTGACCC CGCTCTACCC GAACGAGCGA CTGCGCCTCG AGACCGAGCC GCACATCCTC
ACCACGCGCG TCATCGACCT GGTGATGCCG ATCGGCAAGG GCCAGCGCGC CCTCGTCGTG
TCGCCGCCCA AGGCGGGCAA GACCTCGGTG CTCCAGTCGA TCGCCAACGC GATCACGACG
AACAACCCCG AGTGCCACCT GATGGTGGTC CTCGTGGACG AGCGCCCCGA AGAGGTCACC
GACATGCAGC GGTCGGTGAA GGGCGAGGTC ATCGCCTCCA CCTTCGACCG CCCGCCGTCG
GACCACACCA CGATCTCGGA GCTGGCCATC GAGCGGGCCA AGCGCCTGGT CGAGATGGGT
CACGACGTGG TCGTGCTGCT CGACTCCATC ACCCGCCTCG GCCGCGCCTA CAACCTGGCG
GCCCCGGCGT CCGGGCGAAT CCTGTCCGGT GGTGTCGACT CGACGGCGCT GTACCCGCCG
AAGCGCTTCC TCGGCGCCGC CCGCAACATC GAGGGCGGCG GCTCGCTGAC CGTGATCGCC
ACCGCGCTGG TGGAGACCGG GTCGGCCGGT GACAGCGTGA TCTTCGAGGA GTTCAAGGGC
ACCGGCAACG CCGAGCTCAA GCTCGACCGC AAGATCGCCG ACAAGCGGAC CTTCCCGGCG
GTGGACGTGG ACTCGTCCGG CACCCGCAAG GAGGACCTGC TGCTGTCCCC GGACGAGCTG
GCGGTCATGC ACAAGCTGCG CCGGGTGCTG CACGCGCTCG ACGGCCAGCA GGCGATCGAC
CTGCTGCTCG ACCGGCTGCG CAAGACGCGC ACCAACATCG AGTTCCTGAT GCAGGTCGCG
AAGACCACGC CGGGCGCGGA CAACGACTGA
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| Protein sequence | MSNTDVLSSD SAAPNAAASS GAEENALSTP TNGGAPARKR AGLSGMVLAE LRELAGQLGI
DSTAKLRKGD LIAAIKERQG GTSGRGSAAT PPKAEKPKAE KATAKPAEAP APAAEKAVEK
PTQQQLDVPE RAGEEETGRR GNRRRRSANR PAGSPEAPVA AAAPAAPAQV EAPQQAEQRP
ERVERAERSD RGDRGERSER QGRERGERSD RGDRSDRGER AERSDRGERS DRGERSDRGE
RSDRGERSDR GERGDRSERG ERGDRNRDRD RDRGERGDRN RDRDRQSNNV PEDDGDDEGG
RRGRRFRDRR RRGGRGEGAG VGTDTEVRDD DVLLPVAGIL DVLENYAFVR TSGYLAGPND
VYVSLSLVRK HGLRRGDAII GAVRQPRDGE QQRQKFNPLV RVDKINGLDP EESRNRPDFT
KLTPLYPNER LRLETEPHIL TTRVIDLVMP IGKGQRALVV SPPKAGKTSV LQSIANAITT
NNPECHLMVV LVDERPEEVT DMQRSVKGEV IASTFDRPPS DHTTISELAI ERAKRLVEMG
HDVVVLLDSI TRLGRAYNLA APASGRILSG GVDSTALYPP KRFLGAARNI EGGGSLTVIA
TALVETGSAG DSVIFEEFKG TGNAELKLDR KIADKRTFPA VDVDSSGTRK EDLLLSPDEL
AVMHKLRRVL HALDGQQAID LLLDRLRKTR TNIEFLMQVA KTTPGADND
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