| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6133 |
|---|
| Symbol | |
|---|
| ID | 8330343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7185575 |
|---|
| End bp | 7186147 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644946566 |
|---|
| Product | ATP/cobalamin adenosyltransferase |
|---|
| Protein accession | YP_003103786 |
|---|
| Protein GI | 256380126 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2096] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00636] ATP:cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.901207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTC ACCTCACGAA GATCTACACG CGGGTAGGCG ACGACGGGAC CACCGGTCTC
GGCGACTTCT CCAGGGTCCC GAAGACCGCC CCGCGCATCG CGGCGTACGC GGACGCGGAC
GAGACCGGCG CGGTCCTCGG CGTGGCGATG GCCCTCGGCG CCCTCGCCGA CGACGTCAAG
GCGGTGGTCC TGCGCGTCCA GAACGACCTG TTCGACGTGG GCGCCGACCT GTGCGCCCCC
ATCGTCGAGA ACCCCCAGTA CCCGCCGCTG CGCGTCACCC AGGCCTACGT GGATCGCCTG
GAGACCTGGT GCGACGAGTT CAACGCCCGC CTCGGCAAGC TCGACTCGTT CATCCTCAGC
GGCGGCACCC CCGGCGCGGC CCTGCTGCAC CAGGCCCGCA CGGTGGCGCG CCGGGCGGAG
CGCAGCACGT GGGCGCTGAT CGAGGCCGAG CCGGACACCA CGAACCCGCT GACCGCGAAG
TACCTGAACC GCCTGTCCGA CCTGCTGTTC ATCCTCGCTC GGGTGGCGAA CCCGGACGGC
GACGTCCTGT GGAAGCCCGC CGACAACGCC TGA
|
|---|
| Protein sequence | MAVHLTKIYT RVGDDGTTGL GDFSRVPKTA PRIAAYADAD ETGAVLGVAM ALGALADDVK
AVVLRVQNDL FDVGADLCAP IVENPQYPPL RVTQAYVDRL ETWCDEFNAR LGKLDSFILS
GGTPGAALLH QARTVARRAE RSTWALIEAE PDTTNPLTAK YLNRLSDLLF ILARVANPDG
DVLWKPADNA
|
|---|
| |