Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6118 |
Symbol | |
ID | 8330328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7174636 |
End bp | 7176324 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644946551 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_003103771 |
Protein GI | 256380111 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR01593] toxin secretion/phage lysis holin |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGTGC TCGCTGCGGA AGCTGATCTT CGCCTGGACG CGGGGGCGTT GGACTACGCC CTGCTCGCCC TCTACTTCGT CGTGGTCCTC GGGATCGGGT TCCTCGCCCG CCGGTCCGTG TCCACGAGCC TGGACTTCCT GCTGTCCGGG CGCTCCCTGC CCGCCTGGGT TACCGGCCTG GCGTTCGTGT CCGCCAACCT CGGCGCGATC GAGCTGCTCG GCATGGCCGC CAACGGCGCC CAGTACGGCA TGGCGACCAT GCACTACTAC TGGGTCGGCG CCATCCCGGC GATGGTGTTC CTCGGCCTGG TGATGATGCC GTTCTACTAC GGCTCCAAGG TCCGCAGCGT CCCCGAGTTC CTGCGCCGCC GGTTCGGCAA GGGCGCGCAC CTGGTCAACG CGATCAGCTT CGCCGTCGCC CAGGTCCTCA TCGCGGGCGT GAACCTGTAC GCGCTGGCCC TGCTGCTGAA CCTGCTGCTC GGCTGGCCCA TCCCGCTGTC CGTGGTGATC GCGGCCCTGA TCGTGCTGGC CTACACCACC CTCGGCGGGC TCTCGGCCGC GATCTACAAC GAGGTCCTCC AGTTCTTCGT GATCATCGCC GCGCTGCTGC CGCTCACCAT CGCGGGCCTG CACAAGGTCG GCGGGTGGCA GGGCCTGGTC GACAAGGTCA CCGCCGGCCC CGGCGGCGAG GAGCAGCTGT CCGCGTACCC GGCGACCGAG CTGACCGGGT TCGAGAACCC GGTGCTGAGC GTCATCGGCA TCGTGTTCGG CCTCGGGTTC GTGCTGTCCT TCGGCTACTG GACGACGAAC TTCGCCGAGG TGCAGCGCGC CCTGTCCGCC AAGAGCATGT CGGCGGCCAA GCGCACCCCG ATCATCGGCG CCTACCCGAA GGCGCTGATC CCGGCCGTGA TCGTCATCCC CGGCATCATC GCCGCCGTCG TCGTGCCCGA GATGAGCGCG CTCAAGGCGG GCGAGGCGGC GGACGGCGTC ACCTACAACA ACGCGCTGCC GCTGCTCATG CGCGACCTGC TGCCCAACGG GATGCTCGGC GTCGCCATCA CCGGCCTGCT CGCCTCGTTC ATGGCGGGCG TCGCGGCGAA CGTGTCCTCG TTCAACACGG TGTTCACCTA CGACCTGTGG CAGGACTACG TCCGCAAGGA CCGGCCCGAC GGCTACTACC TGAAGGTGGG GCGCTGGGCC ACGATCGGCG GCACGGTCAT CGCCATCGGC ACCGCGTTCC TGGCGGCGGG CTACGGGAAC ATCATGGACT ACATCCAGTC CCTGTTCTCG TTCTTCAACG CCCCGCTGTT CGCCACGTTC ATCCTCGGCA TGTTCTGGAA GCGGATGTCC GCCGCCGCGG GCTGGACCGG CCTGGTCGCG GGCACGCTCG CGGCCGTGCT GGTGTTCGCG CTCGCCGAGA CCGGGGTGCT CGACCTGCCC GGCCAGGGCG CGAGCTTCCT GGGCGCCGCC GCCGCGTTCG TGGTGGACAT CGTGGTCAGC GTGGTCGTCA CCCTGTTCAC CAGGCCGGTG CCGCGGGAGC GGCTGTCGGG GCTGGTCTAC GGGCTCACGC CCAAGGGCGA CCTCGCGCAC GGCACGGAGG GCGAGGACGC CGGCTGGTAC CGGTCGCCCG CGCTGCTCGG CGGTGGGGTG CTGCTGCTGA CCGCCGTGCT CAACATCGTT TTCAGCTGA
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Protein sequence | MPVLAAEADL RLDAGALDYA LLALYFVVVL GIGFLARRSV STSLDFLLSG RSLPAWVTGL AFVSANLGAI ELLGMAANGA QYGMATMHYY WVGAIPAMVF LGLVMMPFYY GSKVRSVPEF LRRRFGKGAH LVNAISFAVA QVLIAGVNLY ALALLLNLLL GWPIPLSVVI AALIVLAYTT LGGLSAAIYN EVLQFFVIIA ALLPLTIAGL HKVGGWQGLV DKVTAGPGGE EQLSAYPATE LTGFENPVLS VIGIVFGLGF VLSFGYWTTN FAEVQRALSA KSMSAAKRTP IIGAYPKALI PAVIVIPGII AAVVVPEMSA LKAGEAADGV TYNNALPLLM RDLLPNGMLG VAITGLLASF MAGVAANVSS FNTVFTYDLW QDYVRKDRPD GYYLKVGRWA TIGGTVIAIG TAFLAAGYGN IMDYIQSLFS FFNAPLFATF ILGMFWKRMS AAAGWTGLVA GTLAAVLVFA LAETGVLDLP GQGASFLGAA AAFVVDIVVS VVVTLFTRPV PRERLSGLVY GLTPKGDLAH GTEGEDAGWY RSPALLGGGV LLLTAVLNIV FS
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