| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6112 |
|---|
| Symbol | |
|---|
| ID | 8330322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7169121 |
|---|
| End bp | 7169861 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644946545 |
|---|
| Product | dihydroxyacetone kinase, phosphotransfer subunit |
|---|
| Protein accession | YP_003103765 |
|---|
| Protein GI | 256380105 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3412] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR02364] dihydroxyacetone kinase, phosphotransfer subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.334192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGTCT CGCACAGCCG CAAGCTCGCC GAGGGGGTGG TGGAGCTGGC CGGGCAGATG
GCGCCGGAGG TGCGGCTCGT CGCCGTCGGC GGGGACGGCG GCGGTGGGCT GGGGACGGAC
TACGCGGCGG TGGTCGAGGG GCTGGCCGAC GCTGACGGCG GGGGCGGGGT CGTGGTGCTG
TTCGACCTCG GGAGCGCGCG CATGGTCGCG GACCTGGCGG TGGAGGAGTT CGGCGGTGCG
GCGGCGGTCG TGGACGCGCC GCTGGTGACC GGGGCCGTCG CGGCGGCGGT GGCGGCCCAG
GGCGGTGCGG CGCTGGAGGC GGTGGTGGCG GCGGCGCTCT GGGCCTGGGG GAGCGGGGAG
CGGGCGGGCG GTGGTGCCGC CGGTGACGGC GCTGACGGTG GTGCTGACGG TGGTGCCGGT
GCCGGTGCCG GTGCCGGTGC CGGTCCCGGT GGCGCAGGCG GTGCCGCCGG TGACGGCGTG
GTGCGGGCGG TGGTGCCGCT GGTCAACGAC GTCGGGTTGC ACGCGCGGCC CGCCGGGCTG
GTCGCGCGGG CGCTGGCCGG GGTGGACGCG CGCGTGGTCG TCCGGCACGG CGGGCGGGAG
GTCGACGCGC GCAGCGTGCT GGAGCTGATG GGACTCGGCG CGACCGGCGG GGACAGCGTG
GAGGTCGTCG CGGTCGGGGT CGACGCCGAG GAGGCGGTGC GGCGGGTGAC CGAGCTGGCC
GCGCGCGGGT TCGACGGGTG A
|
|---|
| Protein sequence | MVVSHSRKLA EGVVELAGQM APEVRLVAVG GDGGGGLGTD YAAVVEGLAD ADGGGGVVVL
FDLGSARMVA DLAVEEFGGA AAVVDAPLVT GAVAAAVAAQ GGAALEAVVA AALWAWGSGE
RAGGGAAGDG ADGGADGGAG AGAGAGAGPG GAGGAAGDGV VRAVVPLVND VGLHARPAGL
VARALAGVDA RVVVRHGGRE VDARSVLELM GLGATGGDSV EVVAVGVDAE EAVRRVTELA
ARGFDG
|
|---|
| |