Gene Amir_6105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6105 
Symbol 
ID8330315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7164223 
End bp7164663 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content74% 
IMG OID644946538 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_003103758 
Protein GI256380098 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGC TGAGCGGGTT GATCACGGCG GTGGACCACG TCGGCATCGC GGTGCCCGAC 
CTGGACGAGG CGATCGCCTT CCACCGGGAG ACCTTCGGCC TCGTCGTCGC GCACGAGGAG 
GTCAACGAGG AGCAGGGCGT GCGCGAGGCC ATGCTGCGCG CCCCCGGCGA CGGCGGCGGC 
GGCACGGCGG TGCAGCTCCT GGCCCCGCTC AGCCCGAAGT CGACCATCGC GAAGTTCCTC 
GACCGCTCGG GCCCCGGCCT CCAGCAGCTG GCCTACCGGG TGTCCGATGT GGACGCGGCG 
GCCGAGCGGC TGCGCGAGGC GGGCCTGCGG GTGCTGTACG CGAGCGCCAA GCGCGGCACG 
GGCGGCAGCC GGGTGAACTT CGTGCACCCC AAGGACGCGG GCGGCGTGCT GGTCGAGCTG 
GTCGAGCCCG CCGCGCACTG A
 
Protein sequence
MELLSGLITA VDHVGIAVPD LDEAIAFHRE TFGLVVAHEE VNEEQGVREA MLRAPGDGGG 
GTAVQLLAPL SPKSTIAKFL DRSGPGLQQL AYRVSDVDAA AERLREAGLR VLYASAKRGT 
GGSRVNFVHP KDAGGVLVEL VEPAAH