Gene Amir_6097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6097 
Symbol 
ID8330307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7155602 
End bp7157281 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content70% 
IMG OID644946530 
ProductTAP domain protein 
Protein accessionYP_003103750 
Protein GI256380090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACAA CGCTCATCGT GGTGCTGACC ACGCTGCTCA CCACCCCGCT GTTACCCGTG 
CCCGCCTCCG CAGCCCCGAC GGGCGCGGAG GTGGGCCCGG TGGAGATGGG CACGGTGGAG
ATGGGCCCGG TGGAGGTGGG CAGCGAGGTG GGCGCGGAGG TGGGTGGCGG GCCCGTGGCC
GAGCACCTGC TGCGGCAGCG GATCGACTGG ACGCCGTGCG CGGAACCCGA CCTGGCGGGT
CTGGAGTGCG GGGCCTACCG CACCCCGCGC GACTGGGGCG ACCCGGAGGA CTCGCGGACC
ATCACCATCG CGGTGAGCAG GCTCCGCAAC GACGACGCGC GCCGCAGCGT GCTCACCAAC
CCCGGCGGCC CCGGCGGTCA GGGCAGGTTC ACCCCCTTGA TGCTCCAGGG CAGGCAACGC
CTGGTCGAGT CCGCCGAACT GATCGGCTTC GACGTGCGGG GCGCAGGCGC GAGCACCAAC
CTGACCTGCG GAAACCTGAA CTGGCGTCTG GTCGCCGACC CCCGCGACCG CAGCCGCGCG
AACGTGGAGC GCCTCTACGA CGCCGCAGAA CTCCAGGCCC GAACCTGCCA GACCCTCTCC
GGCGACCTGC ACCGCGTGGT CAACACCGAG CAGACCGCCC GCGACCTGGA CCTCCTGCGC
CACCTGCTGG GCCGGGACCG CGTGGACTGG GTCGGCTACT CCAGCGGGAC GTGGCTGGGC
GCGCACTACG CGACCCTCTT CCCGAAGCGC GTGGGCCGTT TCGTGCTCGA CTCGAACGCC
GACCTCACGG CCAGGTTCCA GACCATGTTC CACGACTACT TCGCCCAGGC CTTCCAACGC
CGATTCGACG TGGACTACCT GCCGTGGGTG GCGAAGCACC ACGACGCGTA CGGCCTGGGC
CGAACCGCGG GGGAGGTGAA GCGGGTCTAC GAGGCCGTGC GCGCGAAGCT GGCCGAGGCC
CCTTTCATCC TCCCGGACGG GACGGTGCTG GACGCGATCG CCTTCGACCA GACCGCGTTC
CAGACCCAGT ACCGCAAACT CCTGTTCCCG ATGGTCACCC CGGACCTGGC CGACCTGGCC
CGCCGCTTGG GCGTGGTGGC CCCCGAGCCG CAGTCGGCCT CAGGACCGCG GCTCGCCGCC
TCGGATTTCC CCACCCTGAC CACCCTGACC GCGCTGGCCA GCCGCTACCC GGACGCGGAG
AACGCGACCC TGTTCGCCGT GGCCTGCAAC GACACCCCGT TCCACGGTGG ACGCGCGGAC
CTGGCCCGCG ATGCCGAACG CACCGGTTCC CGGTACCCGT TCTTCGGCTA CCACCAACTG
CTCGCACCCT GCGCCTTCTG GAAACGCCCA CCCCTCACCC TGCCGAAGCC GACCGGCGAG
GGCGCACCCC CGCTCCTGCT GGTCCAATCC GAACGCGACC CGGCAACCCC GGTCGAAGGC
GCCCGCAGAT CCCACAAGAT CCTGAAGGGC TCCCGGATGC TGACCGTCCT GAACGAGGGC
GACCACGGCA TGTACGCCGT GGGGAACAAC CCGTGCGTTG ACCGCGAGGT GGAGGACTTC
CTGGTGGACG GCAAGATCCC AGAACGCGAC CTGACCTGTT CAGGAACGGC CCTACCGATA
CCGAACGAAC TGGGCACGGT GACGACCGCA CTGCCGGCGT TGATCGGGTT TCCGCTGTAA
 
Protein sequence
MRTTLIVVLT TLLTTPLLPV PASAAPTGAE VGPVEMGTVE MGPVEVGSEV GAEVGGGPVA 
EHLLRQRIDW TPCAEPDLAG LECGAYRTPR DWGDPEDSRT ITIAVSRLRN DDARRSVLTN
PGGPGGQGRF TPLMLQGRQR LVESAELIGF DVRGAGASTN LTCGNLNWRL VADPRDRSRA
NVERLYDAAE LQARTCQTLS GDLHRVVNTE QTARDLDLLR HLLGRDRVDW VGYSSGTWLG
AHYATLFPKR VGRFVLDSNA DLTARFQTMF HDYFAQAFQR RFDVDYLPWV AKHHDAYGLG
RTAGEVKRVY EAVRAKLAEA PFILPDGTVL DAIAFDQTAF QTQYRKLLFP MVTPDLADLA
RRLGVVAPEP QSASGPRLAA SDFPTLTTLT ALASRYPDAE NATLFAVACN DTPFHGGRAD
LARDAERTGS RYPFFGYHQL LAPCAFWKRP PLTLPKPTGE GAPPLLLVQS ERDPATPVEG
ARRSHKILKG SRMLTVLNEG DHGMYAVGNN PCVDREVEDF LVDGKIPERD LTCSGTALPI
PNELGTVTTA LPALIGFPL