| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6085 |
|---|
| Symbol | |
|---|
| ID | 8330295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7144523 |
|---|
| End bp | 7145461 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644946518 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003103738 |
|---|
| Protein GI | 256380078 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCA CAGGCAACCC GGCTGTCGTC GTGTCCGACG TCCGCCAGGA CCGGGTCGGC
GGGCGCAGTG CGCTCGACGG CGTCTCCTTC ACCGTCGCCG AGGGTGAGTT CTTCGGCCTG
CTCGGGCCCG CCGGGTCCGG CAAGACCGCG CTGCTCGAAG TCCTCGACGG CCTGCGCCGC
CCCGACTCCG GCCGGGTGGA GCTGCTCGGG GTCGAGCCGT GGCCGCGTGA CGAGCGGCTC
GCGCACCGGG TCGGGATGCG GCCCCAGGTC CCCTCCTTCT TCGACGGCAT GGCCGCGCTC
GACCAGGTCA TGACGTTCGG CGCGCTGCGC GGCGTCGGGG TCACCGAGGC GGTGCGGGCG
CTCGACCTCG TCGGGCTCGC GGGCAAGCTC GACGTGCCCG AGTACCGGAT GACGGCCACC
CAGCGCCAGC TGCTCTCGCT CGCCTGCTGC CTCGCGCACG ACCCCGACGT GCTCCTGCTC
GACGAGCCCA CCGCGGGCCT CGACCCGACC GCCCGCCGCC ACGTGTGGGA CGTCCTGCGC
ACCGTCCAGG CCAGCGGCAA GACCGTCGTG TGCGCCACCG GCCACCCCGA CGAGGCCGAG
ATCCTCTGCG ACCGGGTCGC GGTCCTCGAC CACGGCCGGG TCCTCGCCGC CGACACCCCC
GCCGCCCTCG TGCGCCGCCT CGGCGCGCCC ACGCTGGTCA TCCTGCCCGC GGGCGAGATC
AGCGCGCGCG ACGCGCAGGC CATCACCGGC GTCGACCGCG CCCGCGAGAT CGGCTCCTCG
CTCGTCATCG CCACCCGCCG CCCCGGCCAG GTCCTGTCGG CGCTGTCCGC GCACTGCCCC
ACCGACGGCT TCCAGGTCCG CACCCCCGCG CTGGAGGACG TCTTCCTCGG CCTGACCGGC
CGCGAGTACC CGGTGGCCGC CGACCCCCAG GCGGGGTGA
|
|---|
| Protein sequence | MTGTGNPAVV VSDVRQDRVG GRSALDGVSF TVAEGEFFGL LGPAGSGKTA LLEVLDGLRR
PDSGRVELLG VEPWPRDERL AHRVGMRPQV PSFFDGMAAL DQVMTFGALR GVGVTEAVRA
LDLVGLAGKL DVPEYRMTAT QRQLLSLACC LAHDPDVLLL DEPTAGLDPT ARRHVWDVLR
TVQASGKTVV CATGHPDEAE ILCDRVAVLD HGRVLAADTP AALVRRLGAP TLVILPAGEI
SARDAQAITG VDRAREIGSS LVIATRRPGQ VLSALSAHCP TDGFQVRTPA LEDVFLGLTG
REYPVAADPQ AG
|
|---|
| |