Gene Amir_6082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6082 
Symbol 
ID8330292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7141994 
End bp7142497 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID644946515 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003103735 
Protein GI256380075 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.352412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACC GGCCACTCCC CTTCGACCCC ATCGCGCGCG CCGCCGAGCT GTGGGAGAAG 
CGGATCGGGC CGTCCCCGTC GATGGCGGCG GTGACGAGCG TCATGCGGGT ACAGCAAATC 
ATCCAGTCCG CCGTGGACGC GTCCCTCAAA CCGCACAACC TGACGTTCGC CCGCTACGAG 
GCGCTGGTGC TCCTGACGTT CTCCAAGTCG GGCAGCGTGC CGATGCGCGT GATGGGCGAG 
CGCCTGCAGC TGCACCCGAC GAGCGTGACG AACATCGTGG ACCGCCTGGA GGCCGACGGC 
CTGGTCCGCC GCACCCCGCA CCCGACCGAC CGGCGCACCA CGCTGATCCA GCTCACCGAG 
GCCGGGCACG AGCGGCGCGA GGCGGCGACG AAGGCCGTGA TCGAGGTCAA CTTCGGCATC 
CACGGGCTGA CCGAGCGGCA GACCGAGCAG CTGACGGAGC TGCTGGCGAA GGTCAGGCGG 
ACGGCCGGGG ACTTCGAGGA CTGA
 
Protein sequence
MTHRPLPFDP IARAAELWEK RIGPSPSMAA VTSVMRVQQI IQSAVDASLK PHNLTFARYE 
ALVLLTFSKS GSVPMRVMGE RLQLHPTSVT NIVDRLEADG LVRRTPHPTD RRTTLIQLTE 
AGHERREAAT KAVIEVNFGI HGLTERQTEQ LTELLAKVRR TAGDFED