Gene Amir_6073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6073 
Symbol 
ID8330283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7129983 
End bp7131797 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content69% 
IMG OID644946506 
Producttrehalose synthase 
Protein accessionYP_003103726 
Protein GI256380066 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID[TIGR02456] trehalose synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.887339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACG AGGAACCCCG ACCCGACGCG GCACTCGGTC TGGACGGCAT CCCGCACACC 
GGTGAGGCCA TCGGTGCCGA CGGGCTGCTG GTCGAACCCC AGGCCGAGGA CTTCAAATCG
GCCAGGGAGG TGCCGCGCGA CCAGGCCTGG TACAAGGGCG CGGTGTTCTA CGAGGTGCTG
GTGCGCGCCT TCTCCGACTC GAACGGGGAC GGCACCGGCG ACCTGAGGGG TCTGGCCTCG
CGGCTGGACT ACCTGGAGTG GCTCGGCGTC GACTGCCTCT GGCTGCCGCC GTTCTACGCC
TCGCCGCTGC GCGACGGCGG CTACGACATC AGCGACTTCC GGGCGGTGCT GCCGGAGTTC
GGCACCGTCG ACGACTTCGT GTACCTGCTG GACGAGGCGC ACCGCCGGGG CATCCGGGTG
ATCACCGACC TGGTGCTCAA CCACACCTCG GACGCGCACC CGTGGTTCCA GCAGTCGCGC
GCCGAGCCGG ACGGCCCGTA CGGCGAGTAC TACGTGTGGA GCGACGACGA CTCGCGCTAC
GCGGACGCGC GCGTCATCTT CGTGGACACC GAGTCCTCGA ACTGGACGTA CGACCCGGTG
CGCGGCCAGT TCTTCTGGCA CCGGTTCTTC TCGCACCAGC CGGACCTCAA CTTCGAGAAC
CCGGACGTGC AGGAGGCGAT GCTCGACATC CTGCGGTTCT GGCTGGACCT GGGCATCGAC
GGGTTCCGCC TGGACGCCGT GCCCTACCTG TTCGAGCAGG AGGGCACGAA CTGCGAGAAC
CTGCCGCGCA CGCACGACTT CCTCAAGCGC TGCCGCAAGG TCGTCGACGA CGAGTACCCC
GGCCGGGTGC TGCTGGCCGA GGCGAACCAG TGGCCCGCGG ACGTGGTGGA GTACTTCGGC
GACCCCGAGG TGGGCGGCGA CGAGTGCCAC ATGGCGTTCC ACTTCCCGCT GATGCCGCGC
ATCTTCATGG CGGTGCGCCG CGAGTCCCGC TTCCCGATCT CGGAGATCCT GGCCCAGACG
CCGAGCATCC CGGACGGCTC CCAGTGGGGC ATCTTCCTGC GCAACCACGA CGAGCTGACC
TTGGAGATGG TCACCGACGA GGAGCGCGAC TACATGTACG CGGAGTATGC CAAGGACCCG
CGGATGAAGG CGAACATCGG CATCCGCCGC AGGCTGGCCC CGCTGCTGGA GAACGACCGG
AACCAGCAGG AGCTGTTCAC GGCGATGCTG CTGTCGCTGC CCGGCTCGCC GGTGCTGTAC
TACGGCGACG AGATCGGCAT GGGCGACAAC ATCTGGCTGG GCGACCGCGA CGGCGTGCGC
ACCCCGATGC AGTGGACGCC CGACCGGAAC GCGGGCTTCT CCGGCTGCGA TCCGGGTCGG
CTGTACCTGC CGGTGATCAT GGACCCGGTG TACGGCTACC AGGCGCTCAA CGTCGAGGCG
CAGCTGAACA ACCAGTCCTC GCTGCTGAAC TGGACCCGGC GGATGATCGA GATCCGCAAG
CAGCACCACG CGTTCGCGGA GGGCGACTTC GACGACCTGG GCGGCTCGAA CCCGAGCGTG
CTGGCCTACC GGCGGCGCTG GGCGCGGCCG GACGGCCAGG AGGACATCGT GCTGTGCGTG
AACAACCTGT CCCGGTTCCC GCAGCCCGTC GAGCTGGACC TGGGCGAGCA CCGGGGGCTG
CGCCCGGTGG AGCTGACCGG CGGGGTGCGC TTCCCGCAGA TCGGCGAGCT GTCCTACCTG
CTCACCCTGC CGGGGCACGG CTTCTACTGG TTCCAGCTCG TGGCGGCGGG CGACGACGGC
GAAAGCAGCA GGTGA
 
Protein sequence
MHDEEPRPDA ALGLDGIPHT GEAIGADGLL VEPQAEDFKS AREVPRDQAW YKGAVFYEVL 
VRAFSDSNGD GTGDLRGLAS RLDYLEWLGV DCLWLPPFYA SPLRDGGYDI SDFRAVLPEF
GTVDDFVYLL DEAHRRGIRV ITDLVLNHTS DAHPWFQQSR AEPDGPYGEY YVWSDDDSRY
ADARVIFVDT ESSNWTYDPV RGQFFWHRFF SHQPDLNFEN PDVQEAMLDI LRFWLDLGID
GFRLDAVPYL FEQEGTNCEN LPRTHDFLKR CRKVVDDEYP GRVLLAEANQ WPADVVEYFG
DPEVGGDECH MAFHFPLMPR IFMAVRRESR FPISEILAQT PSIPDGSQWG IFLRNHDELT
LEMVTDEERD YMYAEYAKDP RMKANIGIRR RLAPLLENDR NQQELFTAML LSLPGSPVLY
YGDEIGMGDN IWLGDRDGVR TPMQWTPDRN AGFSGCDPGR LYLPVIMDPV YGYQALNVEA
QLNNQSSLLN WTRRMIEIRK QHHAFAEGDF DDLGGSNPSV LAYRRRWARP DGQEDIVLCV
NNLSRFPQPV ELDLGEHRGL RPVELTGGVR FPQIGELSYL LTLPGHGFYW FQLVAAGDDG
ESSR