| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6067 |
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| Symbol | |
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| ID | 8330277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7119238 |
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| End bp | 7121343 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946500 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003103720 |
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| Protein GI | 256380060 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0573704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCG AACCCATCGT GCTCGCGGGC CGCCCGTTCC CCCTGGGGGC CCACCCGGAG
GCGGGCGGGG TCCGCTTCGC CGTGTCCGCG CCCCCGGCGC ACGCCGTCGA GGTGTGCCTG
GTCGACGAGG ACGGGTCGGA GCGCAGGGTG GAGCTGACCG AGCGGACGTT CGGCGTCTGG
CACGGCCTGA TCCCCGGCGT CACCCCCGGT CAGCGCTACG GGTACCGGGT GCACGGCCCG
TACGACCCGT CGCGGGGCCT GCGCTGCAAC CCGGCGAAGC TGCTCGTGGA CCCGTACGCG
CGGCGGATCA CCGGCAAGGT GACCGACCTG GACGCGGTGC TCGGCTACAC GGGCGACCCG
ATGCTCGGGC CGCCGTCCGC GGTGGACTCG CTGGGGTCCG CGCCGCTGTC CGTGGTGGCC
TCGCCCGGCG GGCCGGACAC GGGCGTGAAG CCTGAGGTGC CGTTCGAGGA GGCGGTGCTG
TACGAGCTGC ACGTGCGCGG GTTCACGAAG CTGCACCCGG ACGTCCCGCC GAAGCTGCGC
GGCACCTACC TGGGGCTCGC CCACCCGGCG GCCGTGGAGC ACCTGGTGCG GTTGGGCGTG
ACGTCGGTGG AGCTGCTGCC GGTGCACGCG TTCATCGATG AGCAGGGCCT CACCCGCGCG
GGCAGGCGCA ACTACTGGGG GTACACGCCG CTGTCGTACT TCGCGCCGCA CCCGGACTAC
GCGTCGGTAC CCGGCGAGGA GGTCGAGGAG TTCCGCACGA TGGTCGCGGC GCTGCACGCG
GTCGGCATCG AAGTGATCAT GGACGTGGTG TTCAACCACA CCTGCGAGGG CGGCCCGGAC
GGCCCGACGC TGTCCTACCG GGGGTACGAC GCGCCCGGCT ACTACCTGCA CACCGACGGC
GGCAGCACGC TCGACATCAC CGGCTGCGGC AACACCCTGG AGGCCGGGTC GCCGCAGGTG
GTGCGGATGG TCACCGACTC GCTGCGGTAC TGGACCACCG AGATGGGCGT GGACGGGTTC
CGGTTCGACC TGGCGTCCAC GCTCGGCAGG CCCGGCGGCG GCTGGTTCGA CCGGTCGTCG
GCGATGCTGA CCGCGATCAC CTCGGACCCG GTGCTGTCCA CCTGCAAGCT GATCGCCGAG
CCGTGGGACG CCACCGGCGA CGGCTACCGG GTCGGCGACT TCGGGGTGCA GTGGGCGGAG
TGGAACGGGC GGTACCGGGA CACCGTGCGG GACTTCTGGC GCGGGTCGAC CGGGGTGCGC
GACCTGGCCT ACCGGCTGTC CGGGTCCTCC GACCTGTACG CCGACGACCT GCGGCGGCCC
TGGCAGTCGA TCAACTTCGT GACCGCGCAC GACGGGTTCA CCCTGCGCGA CCTGGTCTCG
TACAACCACA AGCACAACGA GGCCAACGGC GAGGACAACC GCGACGGCAC CGACGACAAC
CGGTCGTGGA ACTGCGGCGT CGAGGGCGAG ACCGACAACC CTGCGGTGCT GGCGCTGCGG
GCGCGGCAGG CCAGGAACCT GCTGGCGGTG CTGCTGCTGT CCACCGGGAC GCCGATGCTG
ACGGCGGGCG ACGAGCTGTG GCGCACGCAG GGCGGGAACA ACAACGCCTA CTGCCTGGAC
GACGAGACGT CCTGGGTGGA CTGGGCGCCC ACGCCCGAGG TCGACGCGAT GACGGCGTTC
ACCCGGCGGG TGATCTCGCT GCGGGCGGAC AGCCCGGCGC TGCGGCAGCC GGAGTTCTTC
GAGGGGCGGC GGCACGGCGA GCCGGACCTG GTGTGGTTCC GGGCCGACGG CGAGGAGATG
GCGGAGACCG ACTGGTTCGA CGAGGGCAGG CGGTTCCTGG GGATGTGGAT CGACGGGTCG
ACGAGCCTGT CACGCACCAG GGACGGCGAG CTGGTGTCGG ACGACTCGTG GCTGCTGCTG
GTGAACGCGG CGGCGGACGC GGTGGACGTG CGGCTGCCGT CGGCGGAGTA CGGGACGCGG
TACGAGCCGG CGCTGGACTC CAGCACGCCG GACGGGGCGC CCGCGGCGGC CGGTGAGGCG
CTGAAGGCGG GGGCGTCGAT GTCCCTGATG GGGCGGTCGC TGGTGCTGCT GCGGGTGCCG
GAGTAG
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| Protein sequence | MAAEPIVLAG RPFPLGAHPE AGGVRFAVSA PPAHAVEVCL VDEDGSERRV ELTERTFGVW
HGLIPGVTPG QRYGYRVHGP YDPSRGLRCN PAKLLVDPYA RRITGKVTDL DAVLGYTGDP
MLGPPSAVDS LGSAPLSVVA SPGGPDTGVK PEVPFEEAVL YELHVRGFTK LHPDVPPKLR
GTYLGLAHPA AVEHLVRLGV TSVELLPVHA FIDEQGLTRA GRRNYWGYTP LSYFAPHPDY
ASVPGEEVEE FRTMVAALHA VGIEVIMDVV FNHTCEGGPD GPTLSYRGYD APGYYLHTDG
GSTLDITGCG NTLEAGSPQV VRMVTDSLRY WTTEMGVDGF RFDLASTLGR PGGGWFDRSS
AMLTAITSDP VLSTCKLIAE PWDATGDGYR VGDFGVQWAE WNGRYRDTVR DFWRGSTGVR
DLAYRLSGSS DLYADDLRRP WQSINFVTAH DGFTLRDLVS YNHKHNEANG EDNRDGTDDN
RSWNCGVEGE TDNPAVLALR ARQARNLLAV LLLSTGTPML TAGDELWRTQ GGNNNAYCLD
DETSWVDWAP TPEVDAMTAF TRRVISLRAD SPALRQPEFF EGRRHGEPDL VWFRADGEEM
AETDWFDEGR RFLGMWIDGS TSLSRTRDGE LVSDDSWLLL VNAAADAVDV RLPSAEYGTR
YEPALDSSTP DGAPAAAGEA LKAGASMSLM GRSLVLLRVP E
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