Gene Amir_6045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6045 
SymbolmnmA 
ID8330255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7096401 
End bp7097489 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content75% 
IMG OID644946478 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_003103698 
Protein GI256380038 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGC TCGCGGCGAT GAGCGGCGGG GTCGACTCGG CCGTGGCGGC GGCGCGCGCC 
GTCGAGGCCG GGCACGACGT GACCGGGGTG CACCTGGCGC TGTCGGCGAA GCCGGGGACG 
CTGCGCACCG GGTCGCGCGG GTGCTGCACG ATCGAGGACT CGCACGACGC CCGGCGGGCC 
GCCGACGTGC TCGGCATCCC GTTCTACGTG TGGGACTTCG CGGAGCGGTT CACCGAGGAC 
GTGGTGGAGG ACTTCGTCGC GGAGTACGCG GCGGGGCGCA CGCCCAACCC GTGCCTGCGG 
TGCAACGAGC GGATCAAGTT CGAGGCGCTG CTGGACAAGG CCATCGCGCT CGGGTTCGAC 
GCGGTGTGCA CCGGGCACTA CGCGCGGCTC GACGTCGTGG ACGGCTCGGT GGAGCTGCGG 
CGCAGCGCGG ACGAGGGCAA GGACCAGTCG TACGTGCTGG CCTCGCTCAC GCGCGAGCAG 
CTGGCGCACG CGATGTTCCC GCTCGGCGGG TCGACCAAGG TCGAGGTGCG GGCGGAGGCG 
GCGCGGCGCG GGCTGTCGGT GGCGGCGAAG CCGGACAGCC ACGACATCTG CTTCATCCCG 
GACGGCGACA CGCAGGGGTT CCTGACCAAG CGCCTCGGGC AGCGCGCGGG CGTGCTCGTG 
GACGACGAGA CCGGCGCGGT GCTGGGGCAG CACGTGGGCG TGCACGGGTT CACCGTGGGG 
CAGCGCAAGG GCCTGGGCAT CGACGCGCCC GCGCCGGACG GGCGGCCCCG GTACGTGCTG 
TCGCTGGAGC CGGTGTCGGG CACGGTCCGG GTGGGGGCGG CGGAGAAGCT GGCCGTGCGC 
GAGATCGTGG CGGTGCGGCC GGTGTCGCGG GTGGACTGGT CCGGGCCGGT GGAGTGCGTG 
GCCCAGGTGC GCGCGCACGG CGGGACCGCG CCGGCGATCG CGGAGCTGGT CGGCGAGGAG 
CTGGTGGTGC GCCTGCGCGA ACCGCTGTCG GGCGTGGCGC CTGGGCAGGC GGTGGCGGTC 
TACCGGGAGG ACCCGGAGGG CGGCGATCTG GTGCTGGCGA GCGCGACGAT CGAGCGGACC 
GGGGTCTAG
 
Protein sequence
MRVLAAMSGG VDSAVAAARA VEAGHDVTGV HLALSAKPGT LRTGSRGCCT IEDSHDARRA 
ADVLGIPFYV WDFAERFTED VVEDFVAEYA AGRTPNPCLR CNERIKFEAL LDKAIALGFD 
AVCTGHYARL DVVDGSVELR RSADEGKDQS YVLASLTREQ LAHAMFPLGG STKVEVRAEA 
ARRGLSVAAK PDSHDICFIP DGDTQGFLTK RLGQRAGVLV DDETGAVLGQ HVGVHGFTVG 
QRKGLGIDAP APDGRPRYVL SLEPVSGTVR VGAAEKLAVR EIVAVRPVSR VDWSGPVECV 
AQVRAHGGTA PAIAELVGEE LVVRLREPLS GVAPGQAVAV YREDPEGGDL VLASATIERT 
GV