Gene Amir_6041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6041 
Symbol 
ID8330251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7093393 
End bp7094259 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content75% 
IMG OID644946474 
Producthypothetical protein 
Protein accessionYP_003103694 
Protein GI256380034 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG AGCGGATTCC CGCCTACCGG GAGCACTTGA CGCGGCGGAC GATTCTGTGC 
GTGCTGATCG CTGCCCTGCT GCTGGGCGTC CTCGTCGGAG GGCGCCTGCC CGACCTGTCC
GCCGCCACGA AGAAGCTGCT GCGCCTTGGC GTGGTGCTGC TGGGGTTGCA GCTGTCGCTG
CCGGTGGTGC TGGAGCTGGG GCCGGGCGTG CTGGTCGCGG TGGTGGCGAC GGTGGCGGTC
ACCTTCCTGG GCACCCGGTG GATCGGCGGG CTGCTCGGGC TGCCGCGCGG GCTGTCGACG
CTGGTCGCGA CGGGGTTCTC GATCTGCGGG GCGTCGGCGG TGGCGGCCGT GGAGGGCGTG
GTCGAGCGGC GGGACGAGGA CGTGGCGACG AGCGTGGCGC TGGTGACGCT GTTCGGCACG
CTGGCGATGC TGGCGCTGCC GCTGCTGGGC GCGTCGCCGC TGTGGATCGG GCTGAGCGTG
CACGAGGTGG GGCAGGTGGC GGCTGCCGCG CCCGCGTCGG GACTGGCGGC GGCGATGGCG
GTGAAGCTGA GCCGGGTGGC GCTGCTGGCG CCGGTCGTGG CGCTGGTGGG CGGTGGGCGC
GGGTCGGGGG CTCCGGTGGT GCCGCTGTTC CTGGTGGGGT TCGTGGGGCT GGCGGCGCTG
CGGTCGACGG GGGTGCTGCC GCAGGTGGTG CTGGACGGCG GGAAGGTCGC GGCGACGGTG
CTGCTGGCGG CGGCGATGTT CGGGCTGGGC ACGGCGGTGC GGCCGAAGGC GTTGCTGCGC
ACCGGCCCCA GGGCGCTGGC GCTGGGGGCG CTGTCGACGC TGCTGGTGTG CGGGACCGGG
TGGGCGACGC TGGCGCTGCT GACCTGA
 
Protein sequence
MAEERIPAYR EHLTRRTILC VLIAALLLGV LVGGRLPDLS AATKKLLRLG VVLLGLQLSL 
PVVLELGPGV LVAVVATVAV TFLGTRWIGG LLGLPRGLST LVATGFSICG ASAVAAVEGV
VERRDEDVAT SVALVTLFGT LAMLALPLLG ASPLWIGLSV HEVGQVAAAA PASGLAAAMA
VKLSRVALLA PVVALVGGGR GSGAPVVPLF LVGFVGLAAL RSTGVLPQVV LDGGKVAATV
LLAAAMFGLG TAVRPKALLR TGPRALALGA LSTLLVCGTG WATLALLT