| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6032 |
|---|
| Symbol | gatB |
|---|
| ID | 8330242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7083949 |
|---|
| End bp | 7085454 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644946465 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_003103685 |
|---|
| Protein GI | 256380025 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CCTACGAGCT GATGGACTAC GACGAGGTCA TCGAGCGGTT CGACCCCGTC
CTGGGCCTGG AAGTGCACGT CGAGCTGCAC ACCGCCACCA AGATGTTCTG CGGCTGCGCG
AACGTCTTCG GCGGCGAGCC GAACACCAAC GTGTGCCCGG TGTGCCTCGG CCTGCCCGGC
GCGCTGCCGG TGGTCAACGG CACCGCGGTC GAGTCGGCGA TGCGGATCGG CCTCGCGCTC
AACTGCGAGA TCGCCGAGTG GTGCCGGTTC GCCCGGAAGA ACTACTTCTA CCCGGACATG
CCGAAGAACT TCCAGACCTC GCAGTACGAC GAGCCGATCG CCTTCAACGG CTGGCTCGAC
GTCACCCTGG ACGACGGCGA GGTCGTGCGC GTGGAGATCG AGCGCGCGCA CATGGAGGAG
GACACCGGCA AGTCGCTGCA CGTCGGCGGC GCCACCGGGC GCATCCACGG CGCGGAGCAC
TCGCTGCTGG ACTACAACCG GGCGGGCGTC CCGCTGATCG AGATCGTCAC CAAGACGATC
AGCGGCACCG GCGCCCGCGC GCCGGAGGTG GCCCGCGCCT ACGTGACCGC GCTGCGCGAC
CTGCTCAAGG CCCTCGACGT CTCCGACGTG CGCATGGACC AGGGCTCGCT GCGCTGCGAC
GCGAACGTGT CGCTGATGCC GAAGGGCTCC GACGTCCTCG GCACCCGCAC CGAGACGAAG
AACGTGAACT CGCTGCGCAG CGTCGAGCGG GCGGTCCGGT TCGAGATGAC CCGGCACGGC
GCGGTGCTCG CGGGCGGCGG CTCGATCCGC CAGGAGACCC GGCACTTCGA CGAGTCCACC
GGCGGCACCT CCTCGGGCCG CGCCAAGGAG ACCGCCGAGG ACTACCGGTA CTTCCCGGAG
CCCGACCTGG TGCCCGTGGC CCCGTCCCGC GAGTGGGTCG AGCAGCTGCG CGGCACGCTG
CCCGAGCTGC CCTGGGAGCG CCGCAAGCGC ATCCAGACCG AGTGGTCGCT GACCGACGCC
GAGCTGCGGG ACCTGGTCAA CTCGGGCGCG GTCGACCTGG TCGCCGCGAC CGTCGAGGCG
GGGACCACGC CCGCCGAGGC GCGCTCGTGG TGGGTGGCCT ACCTGACCAA GGAGGCCAAC
GGCCGGGGCG TCGAGCTGGG CGAGCTGGCG ATCACGCCGG TCCAGATCGC GCGGGTCGTG
GCGCTGGTCA ACGCGGGCGA GCTGACCAAC AAGCTGGCCC GCGAGGTCGT CACCGGCGTG
CTGGCGGGCG AGGGCGAGCC GGAGGCGGTG ATCGAGGCGC GCGGCCTGAA GGTCGTGTCG
GACGACTCGG CGCTGGAGAA GGCCGTGGAC GAGGCCCTCG CGGCGCAGCC GGACATCGCG
GCGAAGATCC GCGACGGCAA GGTCGCGGCG GCGGGCGCCA TCGTCGGCGC GGTCATGAAG
GCCACCAAGG GCCAGGCCGA CGCGAAGCGG GTGCGGGAGC TGGTCATCGC CCGCTGCGGC
GGCTGA
|
|---|
| Protein sequence | MTTAYELMDY DEVIERFDPV LGLEVHVELH TATKMFCGCA NVFGGEPNTN VCPVCLGLPG
ALPVVNGTAV ESAMRIGLAL NCEIAEWCRF ARKNYFYPDM PKNFQTSQYD EPIAFNGWLD
VTLDDGEVVR VEIERAHMEE DTGKSLHVGG ATGRIHGAEH SLLDYNRAGV PLIEIVTKTI
SGTGARAPEV ARAYVTALRD LLKALDVSDV RMDQGSLRCD ANVSLMPKGS DVLGTRTETK
NVNSLRSVER AVRFEMTRHG AVLAGGGSIR QETRHFDEST GGTSSGRAKE TAEDYRYFPE
PDLVPVAPSR EWVEQLRGTL PELPWERRKR IQTEWSLTDA ELRDLVNSGA VDLVAATVEA
GTTPAEARSW WVAYLTKEAN GRGVELGELA ITPVQIARVV ALVNAGELTN KLAREVVTGV
LAGEGEPEAV IEARGLKVVS DDSALEKAVD EALAAQPDIA AKIRDGKVAA AGAIVGAVMK
ATKGQADAKR VRELVIARCG G
|
|---|
| |