| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6030 |
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| Symbol | |
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| ID | 8330240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7080370 |
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| End bp | 7083012 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644946463 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003103683 |
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| Protein GI | 256380023 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGG CCGTGCACAC ACCCGGTCTC AGACCTCGCG GAACGCGCGG GCCCACCGGA
CCGGACAACG CGATCGAACT CGCCAGGGAA CTCCACCGCA GCGCGCTGGA GGCGGCGACC
GCCGACCGGC ACCCGCTCGC CATCCGGCAG ATGCGCGAGG GGCTCGCCCT GCTGGAGACC
GGGGGCATCG CCCCCCAGGA CCGCCTGGAG GTCCGCGCCA GGCTCATGAG CACCCTGGCC
TTCTGCCTCG CCGAGACCGG CAACGTCGAG CGGGGCCTCA CCCAGCTCGC CGCGGTCGAG
GCCGAGCTGG GCGGCCTGAC CGACGAGGGC CTGCGCGACG GCCTCGCCAT CGTCGTCGCC
GTCAACCAGG CCGCGCTGCT GTGCCGGGTC GGCCGGATCG AGGAGGGCGT CGCCCGGCTC
GACGTGGCCG TCGAGCGCAG CGAGCGCGTC CTCGTCGAGA AGCCCGACGC GGTCGAGCAG
CTCGTCGTCG CGCTGACCAA CCGGGGCAAC GCGCACGGCG AGGCCCAGGA CTACCACCGG
GCGGCCAGGG ACCTGGACCG CGCCGTGGAG CTGGCCGACG CGCACGACCT GCCGACGCGC
TCGGCCATCG CCAAGCACGC CCTCGGCAAC TCGCTCCAGC GCGCGGGCGA CACCCCGGCC
GCGCTGCGCC ACTACCACGA CGCGGCGCTC GCGTTCCAGA GGCTGGAGCC CGGCCTGCTG
CTGCGGCTGC GCATCGACCA GGCCGAGGCG CTCATCGGCG TCGGCCTGGC CGACGAGGCG
GGCAGGCTGC TCGACGAGGT GCTGCCCGAG CTGCGCCGCC AGCGCATCGG GCAGGACGTC
GCCGAGGCCG AGCTGTTCCG CGCCGCCGCC GCCCTCCAGG ACGGCGACCT CGTGCTCGCC
AAGCGGATGG CCAAGGCCGC GCAGCGCAAG CTGCTGCGGC GCGGCAGCCC GGCGTGGGCG
GGTGTCGCGG GCCTGCTGGC GCTGCGGGTG GACGTCCAGC GGGCGCTCCA GGCCCCCCGC
CGCCCGCCCG AGCAGCTGGT GCGCAGGGCC ATCGCGCTGT CCGCCGAGCT GACCGCGCTG
CGGCTGGTCG AGCAGGCCGC GCTCGCGCTC GTGCTGTCGG CCAGGCTGGA GATCCGCAGG
GGCGCGCCCG ACCGGGCCGA CGGGCTGCTG CGCGGGGTCG TCCGGTCGCA CAAGTTCGTC
GCCATCGACC TGCGGATGCT GCTGCGGCTG TGCCGGGCGG AGCTGGCGCT GGCGCGCGGC
AACCGGCGCG TCGCGCTCGC CCAGGCCAAG GCCGGGCTGG ATGAGCTGGG CCGGATGCGC
GACCGGCTCG GCGGGCTGGA GATGATGTCC GGCACCGCCG TGCACGGCCT CGAACTGGGC
GAGCTGGCCG TGCGGCTGGC GCTGGAGGGC GCGGGCTCGG CCGAGGGCGC GCAGCGGTTG
TTCACCTGGT TGGAGCGCAC CAAGGCCCAG CTGTACCGCT ACGACCCGGT CGAGACGCCC
GAGGACGACG GGCTCACCGA GCGGGTCACC GAGGTCCGCA GGCTCACCGG CGCGCTGCTG
CGCGCCCGCC TCGACGGGCA GTCCACCGGG GCCCTGGAGG AGCGGCTGCG GCTGGCCAAG
CACGCGGCCA CCCGGCTCGG CTGGGGAGCG GCCCCGTGGG GCACGCCCCG GCCGGTGGTC
ACCGCCGCCG AGGTCGCCGC CGCGCTCGGC GACCGGACGC TGGTCAGCTA CGCGGTGTCC
GACGACGAGC TCGTCGCCGT CGTGCTGGTC GACGGCCTGG TGCGGCTGGT CCGGCTCGGA
CCAGCCGGGG TCGTCGCCGA GAGCGCGCGC AGGCTGCACG CCGACCTGAA CGCGCTGGCC
CCCGACCACC TGCCCGCGCC GCTGGTCGAG GTGATCTCCG CGTCGGCCAG GCGGCAGGCC
GAGGTGCTGG ACCAGGCGCT GCTCCGCCCG CTCGCCGCCA TGCTCGGCGG GCGGGAGCTG
GTCGTGGTGC CCACCGGGGC GCTGCACGCG GTGCCGTGGG GCGTGCTGCC CACCTGCGCG
GGCAGGCCGA CCTCGGTGGT GCCGTCGGCG ACGGCCTGGG TGTCCGCGCT GGGCAGCGGC
CAGGACGACC CGGACGGGGT GCTGCTGGTG CGCGGGCCCG GCCTGCAGGC GGCGCAGACC
GAGCTGGACC GGCTGGCCGG CTACCACGAC CGGCCCACCG TGCTGGACGT GCCGCAGGCC
AAGGTCGGCG CGGTGCTGAC CGCGCTGGCC GGGCAGGGGC TGGCGCACAT CGCCGCGCAC
GGCGAGCACG AGCCGGAGAA CGCGCTGTTC TCCCGGCTGG AGCTGACCGA CGGCGCGGTG
TTCGCCTACG AGATCGGCCG GGTGCGGCAG CTGCCCACCA AGGTCGTGCT GTCCGCGTGC
GAGCTGGCGC TCAACCGGGT GCGGCCCGGC GACGAGCCGC TCGGGTTCGC CGGTGCGCTG
CTCGCGGGCG GGGTGCGGAC GGTGATCGCG GCGTCCAGCA AGGTCGGCGA CGAGCCGTCC
GCGCTGGCGA TGGAGGTGTT CCACCGGGAG CTGCTCGCGG GGGAGAGCCC GGCGCTGGCG
CTGGCGCGCG CGGTCGCCGA GGACCCGCTG CGAAGACCCT TCGTGTGCCT GGGGGCCGGC
TAG
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| Protein sequence | MAVAVHTPGL RPRGTRGPTG PDNAIELARE LHRSALEAAT ADRHPLAIRQ MREGLALLET
GGIAPQDRLE VRARLMSTLA FCLAETGNVE RGLTQLAAVE AELGGLTDEG LRDGLAIVVA
VNQAALLCRV GRIEEGVARL DVAVERSERV LVEKPDAVEQ LVVALTNRGN AHGEAQDYHR
AARDLDRAVE LADAHDLPTR SAIAKHALGN SLQRAGDTPA ALRHYHDAAL AFQRLEPGLL
LRLRIDQAEA LIGVGLADEA GRLLDEVLPE LRRQRIGQDV AEAELFRAAA ALQDGDLVLA
KRMAKAAQRK LLRRGSPAWA GVAGLLALRV DVQRALQAPR RPPEQLVRRA IALSAELTAL
RLVEQAALAL VLSARLEIRR GAPDRADGLL RGVVRSHKFV AIDLRMLLRL CRAELALARG
NRRVALAQAK AGLDELGRMR DRLGGLEMMS GTAVHGLELG ELAVRLALEG AGSAEGAQRL
FTWLERTKAQ LYRYDPVETP EDDGLTERVT EVRRLTGALL RARLDGQSTG ALEERLRLAK
HAATRLGWGA APWGTPRPVV TAAEVAAALG DRTLVSYAVS DDELVAVVLV DGLVRLVRLG
PAGVVAESAR RLHADLNALA PDHLPAPLVE VISASARRQA EVLDQALLRP LAAMLGGREL
VVVPTGALHA VPWGVLPTCA GRPTSVVPSA TAWVSALGSG QDDPDGVLLV RGPGLQAAQT
ELDRLAGYHD RPTVLDVPQA KVGAVLTALA GQGLAHIAAH GEHEPENALF SRLELTDGAV
FAYEIGRVRQ LPTKVVLSAC ELALNRVRPG DEPLGFAGAL LAGGVRTVIA ASSKVGDEPS
ALAMEVFHRE LLAGESPALA LARAVAEDPL RRPFVCLGAG
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