| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6027 |
|---|
| Symbol | |
|---|
| ID | 8330237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7077291 |
|---|
| End bp | 7078169 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946460 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_003103680 |
|---|
| Protein GI | 256380020 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCC TGTCCGGTGT GGACGGTGTC CGCGCGCTCC GCTACGAACC GGGGAAGCCC
CTCCCCGAGG GCGCGGAGGC CGCCGAGGTG CTCGTCCCCC GCTTCCTCCA GGGCAGCGAC
CCGCGCGAGG TGCTCGCCCA GCTGCCGAAC CTCAGGCTCG TGCAGCTGCT GAGCGCGGGC
GTCGAGCGGT TCCTCGGGCT CGTGCCGGAC GGCGTGCTGC TGTCCACCTG CCGGGGCGCG
CACGGCGGCA GCACCGCCGA GTGGGCCGTC GGCGCGCTGC TGTCGGTCTA CCGCGACTTC
CCGGTGTTCC AGCGCCTGGC CGACGCGGGC CGCTGGGAGC ACCACGTCAC CGAGACCCTC
CAGGACAAGA AGGTGCTCGT GGTCGGCGCG GGCGACCTCG GCAGGCAGTT CCAGCGCAGG
GTCGAGCCGT TCGACGCCAC CACCACCCTG GTCGGCCGCA CCGCCCGCGA CGGCGTGCGC
GCCATGTCCG AGCTGCCCGA CCTGCTGCCG CACCACGACG CCGTGCTGCT GGTCGTGCCG
CTGACCTCGG AGACCGACGG CATGGTCGAC GCGGAGTTCC TGGCCCGGAT GCCGGACGGG
GCCGTGCTGG TCAACGCCGC GCGCGGCCGG GTCGTGGACA CCGACGCGCT CGTCGCCGAG
CTGCTCTCCG GGCGGCTGCG CGCCGCGCTC GACGTGACCG AGCCCGAGCC GCTGCCGCAG
GGCCACCCGC TGTGGACCGC GCCCGGCCTG TTCCTCACCC CGCACGTGGC GGGCAGCTGC
ACCGGGCACA CCGCGCGGGC CTACGCGGTG GTCAGGGCCG AGGTCGAGCG GTTCGCCAGG
GGCGAGCGGC CAGCCAATGT GGTGAACGGC GAGTACTGA
|
|---|
| Protein sequence | MTALSGVDGV RALRYEPGKP LPEGAEAAEV LVPRFLQGSD PREVLAQLPN LRLVQLLSAG
VERFLGLVPD GVLLSTCRGA HGGSTAEWAV GALLSVYRDF PVFQRLADAG RWEHHVTETL
QDKKVLVVGA GDLGRQFQRR VEPFDATTTL VGRTARDGVR AMSELPDLLP HHDAVLLVVP
LTSETDGMVD AEFLARMPDG AVLVNAARGR VVDTDALVAE LLSGRLRAAL DVTEPEPLPQ
GHPLWTAPGL FLTPHVAGSC TGHTARAYAV VRAEVERFAR GERPANVVNG EY
|
|---|
| |