Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6024 |
Symbol | |
ID | 8330234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7073265 |
End bp | 7075109 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946457 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_003103677 |
Protein GI | 256380017 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCCGC TCCGTTCCCG AACCACCACC CACGGCCGCA ACGCCGCAGG CGCCCGCGCG CTGTGGCGCG CCACCGGCAT GACCGACTCG GACTTCGGCA AGCCGATCGT GGCGATCGCC AACTCGTACA CGCAGTTCGT GCCCGGTCAC GTGCACCTGC GCGACCTCGG CGACATCGTC GCCGAGGCGA TCCGCGAGGC GGGCGGGGTG CCGCGCGAGT TCCACACCAT CGCGGTGGAC GACGGGATCG CGATGGGCCA CAGCGGGATG CTCTACTCGC TGCCCTCGCG CGAGATCATC GCCGACTCGG TCGAGTACAT GGTGAACGCG CACCAGGCCG ACGCGATCGT CTGCATCTCC AACTGCGACA AGATCACGCC GGGGATGCTC AACGCCGCGA TGCGGCTGAA CATCCCGGTC GTGTTCGTCT CCGGCGGGCC GATGGAGGCG GGCAAGGCGG TCGTGGTGGA CGGCGTCGCC GTCGCGCCGA CCGACCTGAT CACCGCGATC TCCGCGTCCG CGTCGCCGGA GGTGGACGAC GAGGGCCTGT CGGTCGTGGA GCGCTCGGCG TGCCCGACCT GCGGGTCGTG CTCGGGCATG TTCACCGCGA ACTCGATGAA CTGCCTCACC GAGGCGCTGG GCCTGGCGCT GCCGGGCAAC GGCTCGACGC TGGCCACGCA CTCCGCGCGC CGCGAGCTGT TCTCCGAGGC CGGTCGGGTC GTGGTGGAGC TGTGCAAGCG CTACTACGGC GAGGACGACG AGTCGGTGCT GCCGCGCTCG ATCGCGAACC GCGCCGCGTT CGAGAACGCG ATGGCGCTGG ACATGGCCAT GGGCGGCTCG ACCAACACCG TGCTGCACAT CCTGGCCGCC GCGCAGGAGG GCGAGGTCGA GTTCGACCTG TCCGACATCA ACGCGCTCAG CCGCCGGGTG CCGTGCCTGG CGAAGGTCTC GCCGAACTCC GACTACCACA TGGAGGACGT GCACCGGGCC GGTGGCATCC CCGCGCTGCT GGGCGAGCTG TACCGGGCCG GGCTGCTCAA CGAGGACGTC ACCACCGTCC ACTCGCGCAC GATGGCGCAG TGGCTCGGCG AGTGGGACGT CAGGGCCGAG TCGCCGTCCG AGCGCGCGGT GGAGCTGTTC CACGCCGCGC CCGGCGGGGT GCGCACCACG CAGGCGTTCT CCACCTCCAA CCGCTGGTCG AAGCTGGACA CCGACGCGGC GGGCGGGTGC ATCCGGGACG TCGAGCACGC GTACACCAAG GACGGCGGGC TGGCCGTCCT GCACGGCAAC CTGGCCGAGT CCGGCGCGGT CATCAAGTCG GCGGGCATCG ACGAGGACCT GTGGCGGTTC GAGGGCCCGG CGCGCGTGGT CGAGTCCCAG GAGCAGGCGG TCTCGGTGAT CCTGAACAAG GAGATCCAGG CCGGTGACGT GCTCGTGGTC CGCTACGAGG GCCCGTCCGG CGGTCCGGGG ATGCAGGAGA TGCTGCACCC GACCGCGTTC CTCAAGGGCG CGGGCCTCGG CAAGAAGTGC GCGCTGATCA CGGACGGCCG GTTCTCCGGC GGCACCTCGG GCCTGTCCAT CGGCCACGTC TCGCCGGAGG CGGCGGGCGG CGGGCTGATC GGCCTGGTGC AGGACGGCGA CCGGATCGTC ATCGACGTGC ACGAGCGCAA GCTGGAGCTG CTGGTCGACG AGGCGGTGCT GGCCGACCGG CGGGCGAAGA TGGAGACCTC GGAGCGGCCG TGGCAGCCGG TGGACCGGGT GCGCCCGGTG ACGGCGGCGC TGCGCGCGTA CGCGCGGATG GCGACGGACG CGTCGAGGGG CGCGGTGCGC GACGTCAACC GGTGA
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Protein sequence | MPPLRSRTTT HGRNAAGARA LWRATGMTDS DFGKPIVAIA NSYTQFVPGH VHLRDLGDIV AEAIREAGGV PREFHTIAVD DGIAMGHSGM LYSLPSREII ADSVEYMVNA HQADAIVCIS NCDKITPGML NAAMRLNIPV VFVSGGPMEA GKAVVVDGVA VAPTDLITAI SASASPEVDD EGLSVVERSA CPTCGSCSGM FTANSMNCLT EALGLALPGN GSTLATHSAR RELFSEAGRV VVELCKRYYG EDDESVLPRS IANRAAFENA MALDMAMGGS TNTVLHILAA AQEGEVEFDL SDINALSRRV PCLAKVSPNS DYHMEDVHRA GGIPALLGEL YRAGLLNEDV TTVHSRTMAQ WLGEWDVRAE SPSERAVELF HAAPGGVRTT QAFSTSNRWS KLDTDAAGGC IRDVEHAYTK DGGLAVLHGN LAESGAVIKS AGIDEDLWRF EGPARVVESQ EQAVSVILNK EIQAGDVLVV RYEGPSGGPG MQEMLHPTAF LKGAGLGKKC ALITDGRFSG GTSGLSIGHV SPEAAGGGLI GLVQDGDRIV IDVHERKLEL LVDEAVLADR RAKMETSERP WQPVDRVRPV TAALRAYARM ATDASRGAVR DVNR
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