Gene Amir_6020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6020 
SymbolilvH 
ID8330230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7069289 
End bp7069795 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID644946453 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_003103673 
Protein GI256380013 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.103742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC ACACCCTCAG CGTCCTCGTC GAGGACAAGC CCGGCGTCCT GGCCAGGGTC 
GCGGGGCTGT TCTCCCGGCG CGGCTTCAAC ATCGAGTCGC TCGCGGTGGG CCGCACCGAG
CACCCGGACA TCTCCCGGAT GACGATCGTG GTCGCCGTGG AGGAGCTGCC GCTGGAGCAG
GTCACCAAGC AGCTCAACAA GCTCGTCAAC GTCATCAAGA TCGTCGAGCT GGAGACGGCC
GCCTCGGTGC AGCGCCAGCT CCTGCTCGTC AAGGTCCGCG CTGACGCCAC CGTGCGCAGC
CAGGTCCTCG AGACGGTCCA GCTGTTCCGC GCCAAGGTCG TCGACGTCTC CCCGGAGGCG
GTCACGGTCG AGGCGACCGG CACGTCGGAG AAGCTCGACG CGCTGCTCAG GATGCTGGAG
CCCTACGGGC TGCGCGAGAT CGTGCAGTCC GGCATGGTCG CCATCGGCCG TGGCGCCCGT
TCCATCACCG CGACCGCGGT GCGCTGA
 
Protein sequence
MTKHTLSVLV EDKPGVLARV AGLFSRRGFN IESLAVGRTE HPDISRMTIV VAVEELPLEQ 
VTKQLNKLVN VIKIVELETA ASVQRQLLLV KVRADATVRS QVLETVQLFR AKVVDVSPEA
VTVEATGTSE KLDALLRMLE PYGLREIVQS GMVAIGRGAR SITATAVR