| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6017 |
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| Symbol | |
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| ID | 8330227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7065728 |
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| End bp | 7067326 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946450 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003103670 |
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| Protein GI | 256380010 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.214925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACA CGAGCCGACC CGTCGTCCTG ATCGCCGAGA AGCTGGCACC CTCCGTGCTC
GACGTCTTCG GCGAGGACAT CGAGGTGCGC CACGTCGACG GCACCGACCG ACCCGCGCTG
CTCTCCGCCG TCGCGGACGC GGACGCGCTC CTCGTGCGGT CCGCCACGAA GGTCGACGCC
GAGGTGTTCG CGGCGACCTC GAAGCTGAAG GTGGTCGCCC GCGCGGGCGT CGGCCTGGAC
AACGTCGAGG TGCCCGCCGC GACCGAGCGC GGTGTCATGG TGGTCAACGC GCCCACCAGC
AACATCGTCT CCGCCGCCGA GCACGCCGTC GCGCTGCTGC TGTCGGTGGC CAGGCAGATC
CCGGCCGCCC ACGCCACCCT CGCGGGCGGC GCGTGGAAGC GCAGCTCCTT CAACGGCGTC
GAGCTCAACG GCAAGACCGT CGGCGTGGTG GGCCTGGGCA AGATCGGGCA GCTGTTCGCG
GCCCGGCTCG CGGCCTTCGG CACCTCCATC ATCGCGTACG ACCCCTACGT GGCCGCCGCC
CGCGCCGCCC AGCTCGGCAT CGAGCTGGTG TCGCTGGAGG AGCTGCTGGA GCGGGCCGAC
GCCATCTCCA TCCACCTGCC CAAGACCCCC GAGACCAAGG GCCTGATCGG CGCCGAGCAG
CTGGCCAAGA CCAAGCGCGG CGTCATCGTC GTCAACGCCG CGCGCGGCGG CCTGATCGAC
GAGGACGCGC TCGCCGAGGC CGTGCAGAGC GGCCAGGTCG GCGGCGCGGG CATCGACGTG
TTCGCCACCG AGCCCACCAC CGCCAGCCCG CTCTTCGGGC TCCCGAACGT CGTCGTCACC
CCGCACCTGG GCGCCTCCAC CAGCGAGGCG CAGGACCGCG CGGGCACGGA CGTGGCCAAG
TCGGTGCTGC TCGCCCTCGC GGGCGACTTC GTGCCGGACG CGGTCAACGT GCAGGGCGGC
GGCGTGGTCG GCGAGGAGGT CCGGCCGTAC CTGCCGCTCG TGCAGAAGCT CGGCACGGTC
GTCGCGGCGC TCAGCGCCAA GGCGCCCACC TCGGTCACCC TGGAGGTGCG GGGCGAGCTG
TCCAACGAGG ACGTGAGCGT GCTGCCGCTG GCCGCGCTGC GCGGGGTGTT CTCCAGCGTG
GTCGAGGAGC AGGTGACGTT CGTGAACGCG CCCGCGCTCG CCGCCTCGCT CGGCGTGTCG
GTCGACGTGG TCAAGGAGCC CTCCAGCGCC AACCACCGCA GCCTGGTGAC CGTGCGGGCG
GTGCAGGCCG ACGGCTCGGT GCTGACCGTG TCCGGCACGC TGACCGGCCT CGACCAGGTC
GAGAAGATCG TGGGCGTCAA CGGCCGCAGC TTCGACCTGC GCGCCGAGGG CAACGTGCTG
CTGCTGGAGT ACTCGGACCG GCCCGGCGTC ATGGGCACCG TCGGCACGCT CCTCGGCGAG
GCCGGGGTGA ACGTGGAGGC GGCGCAGATC AGCCAGCAGA AGGGCGGCTC CGAGGCCCTC
ATGCTGCTGC GCGTCGACCG CCCGGTCGAC AGCAACGTGC TCGACCCGAT CGGCGCGTCG
GTCGGCGCGC GCACCATGCG CTCGGTCAAC TTCGACTGA
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| Protein sequence | MSNTSRPVVL IAEKLAPSVL DVFGEDIEVR HVDGTDRPAL LSAVADADAL LVRSATKVDA
EVFAATSKLK VVARAGVGLD NVEVPAATER GVMVVNAPTS NIVSAAEHAV ALLLSVARQI
PAAHATLAGG AWKRSSFNGV ELNGKTVGVV GLGKIGQLFA ARLAAFGTSI IAYDPYVAAA
RAAQLGIELV SLEELLERAD AISIHLPKTP ETKGLIGAEQ LAKTKRGVIV VNAARGGLID
EDALAEAVQS GQVGGAGIDV FATEPTTASP LFGLPNVVVT PHLGASTSEA QDRAGTDVAK
SVLLALAGDF VPDAVNVQGG GVVGEEVRPY LPLVQKLGTV VAALSAKAPT SVTLEVRGEL
SNEDVSVLPL AALRGVFSSV VEEQVTFVNA PALAASLGVS VDVVKEPSSA NHRSLVTVRA
VQADGSVLTV SGTLTGLDQV EKIVGVNGRS FDLRAEGNVL LLEYSDRPGV MGTVGTLLGE
AGVNVEAAQI SQQKGGSEAL MLLRVDRPVD SNVLDPIGAS VGARTMRSVN FD
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