Gene Amir_6007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6007 
Symbol 
ID8330214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7051495 
End bp7052196 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID644946437 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003103660 
Protein GI256380000 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.325748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACAGC ATAGCGGGAT CGGCGTCCTG GACAAGGCAG TGGCCGTGTT GAACGCCGTG 
GCAAAAGATC CATGCGGGCT CGCGGAGTTG TGCAACCGCA CGGGTCTGCC GAGAGCGACA 
GCGCACCGCT TGGCGGTGGG CTTGGAGGTG CACCGCCTGC TGCGCAGGGG TTCGGACGGC 
CGCTGGCGCC CAGGGGCGGC TCTGGCGGAA CTGGCGGGCG GCGCGACCGA CCCGCTCCTC 
GACGCGGCGA CCTCGGTCCT GCCGCGCCTG CGCGACATCA CCGGCGAGAG CGTCCAGCTC 
TACCGCCGCG ACGGGATGCA GCGCGTCTGC GTGAGCGCCG CGGAACCCCC GAGCGGCCTC 
AGGGACACCG TCCCGGTGGG CGCGCGACTG CCCATGACCG CGGGCTCCGG CGCGAAGGTC 
CTGGCCGCCT GGTCCGATCC CGGAACCCAG CGCGCCATCC TCGCCGACGC CGTCTACGGC 
GAGCGCACCC TCCTGGAGGT CCGCCGCCGC GGCTGGGCCC AGAGCGTCGC CGAACGCGAA 
CCGGGCGTGG CCAGCGTCAG CGCCCCCGTC CGCGACAGCA GCGGCACCGT GGTGGCCGCC 
ATCTCGGTCT CAGGCCCCAT CGACCGCATG GGCCGCCGCC CGGGCGCCAG ATGGGCAGCG 
GACCTCCTGG CGGCAGCGGA AGCCCTGCAA AGCCGCCTGT AA
 
Protein sequence
MGQHSGIGVL DKAVAVLNAV AKDPCGLAEL CNRTGLPRAT AHRLAVGLEV HRLLRRGSDG 
RWRPGAALAE LAGGATDPLL DAATSVLPRL RDITGESVQL YRRDGMQRVC VSAAEPPSGL 
RDTVPVGARL PMTAGSGAKV LAAWSDPGTQ RAILADAVYG ERTLLEVRRR GWAQSVAERE 
PGVASVSAPV RDSSGTVVAA ISVSGPIDRM GRRPGARWAA DLLAAAEALQ SRL