Gene Amir_6004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6004 
Symbol 
ID8330211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7048316 
End bp7049173 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID644946434 
Producthistone family protein DNA-binding protein 
Protein accessionYP_003103657 
Protein GI256379997 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0576704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGG CCCAGCTCAT CGAGGCGCTC GCCGAGCGCC TTGGCGACAA GAAGAACGCA 
GCCGCCGCAG TTGACGGCAT CGTCGATGTC ATCGTCCGGA GCGTCCACAA GGGCGAGAAG
GTCAACATCA CGGGCTTCGG CGTCTTCGAG AAGCGCGCTC GCGCGGCACG CACGGCGCGG
AACCCGCGCA CCGGTGAGAC CGTGAAGGTC AAGAAGACCA ACGTTCCCGC GTTCCGCGCG
GGTTCGACGT TCAAGGACGT CATCAGCGGG GCCAAGAAGC TGCCCCGCGT CACGGCCGCC
AAGCCCGCCG CGACCGCCAC CGCCGCGAAG GCGACGACGA CCGCCGCGAA GCCCGCCACG
ACCGCCACCA AGGCGCCCGC GGCCAAGGCG ACCACCACGC GGACCGCGCG CAGCACCACC
ACGCGCGCCG CCGCCGCGAC GAAGGCGCCC GCCCGTCGCA CCGCCACCGC TGCCGCGAAG
ACCTCCGCCA CCACGGCGAA GGCCGCCCCG GCCGCCAAGA CCACCGCCGC GAAGGCGCCC
GCCACCAAGG CCACCGCCAC CAAGGCGGCG CCGAAGACGG CGACCACCGC CAAGCGGACG
ACCACGGCGA AGACGGCCGC CACCAAGGCC GCGTCCACCT CCGCCACCGC GACCAAGCCT
GCCGCGACCA AGGCCGCTCC GGCCAAGGCC ACCGCGACCA AGGCGGCTTC CACCAAGACG
GCCGCGGCTG CCAAGACGGC TGCTCCGGCC GCCGCCGCGA CCACCGAGAA GCCGGCTGCG
AAGGCCACCC CGGCCGCCAA GACGTCCGCC GCGAAGCGCA CCACCACGCG GAAGACCACC
ACGGCCGCCA AGAAGTGA
 
Protein sequence
MNKAQLIEAL AERLGDKKNA AAAVDGIVDV IVRSVHKGEK VNITGFGVFE KRARAARTAR 
NPRTGETVKV KKTNVPAFRA GSTFKDVISG AKKLPRVTAA KPAATATAAK ATTTAAKPAT
TATKAPAAKA TTTRTARSTT TRAAAATKAP ARRTATAAAK TSATTAKAAP AAKTTAAKAP
ATKATATKAA PKTATTAKRT TTAKTAATKA ASTSATATKP AATKAAPAKA TATKAASTKT
AAAAKTAAPA AAATTEKPAA KATPAAKTSA AKRTTTRKTT TAAKK