Gene Amir_6000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6000 
Symbol 
ID8330207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7042317 
End bp7042931 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content80% 
IMG OID644946430 
Producthypothetical protein 
Protein accessionYP_003103653 
Protein GI256379993 
COG category[S] Function unknown 
COG ID[COG1920] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAGCGG ACGTCGACCT GGTGGTGCCG GTGAAGAGCC TCGACCGGGC CAAGACGCGG 
TTGGATGCGG GGACCGGCCG GAGGGCGCTG GCGCTGGCGT TCGCCCTGGA CCTGGTGGGT 
GTGGCGCGGC GGGTGGCGCG GTCGGTGCTG GTGGTGACGG CGGACCCGGT GGTCGCGGGC 
GAGCTGGCGG CGGCCGGGGT GGAGACGGCG GTGGGCCCGG ACGGGCTGAA CCCGGCGCTG 
CGCTTCGGCG CGGCGGTGCT GCGGGGGCGC GACCCCCGGT CGGTGGTGGG CGCGCTGCAG 
GCCGACCTGC CGGCGCTGCG CGAGGTGGAG CTGCGGGCGG CCGTGGTGGA GGCGGGGGGC 
GAGCGGGCGT TCTGCGCGGA CCGGCAGGGC ACGGGGACGA CGCTGCTGCT GTCGGCGGCG 
GGGCGCGACC TGGAGCCGGC GTTCGGCGGC CCGTCGGCGG CGGCGCACCG GGGCGGCGGG 
GCGCGGGAGC TGCTGGGCGA CTGGCCGACG CTGCGGTGCG ATGTGGACAC GCTGGAGGAC 
CTGGCGCTGG CGGCCGGGTA CGGGCTGGGG GCGCGGAGCG CGCAGGCGTG GGCGCGGGTG 
CGGGTCGCGG GGTGA
 
Protein sequence
MRADVDLVVP VKSLDRAKTR LDAGTGRRAL ALAFALDLVG VARRVARSVL VVTADPVVAG 
ELAAAGVETA VGPDGLNPAL RFGAAVLRGR DPRSVVGALQ ADLPALREVE LRAAVVEAGG 
ERAFCADRQG TGTTLLLSAA GRDLEPAFGG PSAAAHRGGG ARELLGDWPT LRCDVDTLED 
LALAAGYGLG ARSAQAWARV RVAG