Gene Amir_5978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5978 
Symbol 
ID8330185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7024732 
End bp7026369 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content78% 
IMG OID644946408 
ProductDak phosphatase 
Protein accessionYP_003103631 
Protein GI256379971 
COG category[R] General function prediction only 
COG ID[COG1461] Predicted kinase related to dihydroxyacetone kinase 
TIGRFAM ID[TIGR03599] DAK2 domain fusion protein YloV 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCTC TCGACGCTTC CGCGATCCGC CGCTGGGCGG ATGCCTGCGT GCGGTCGCTG 
GCCGCCCACC GCGAGGACAT CGACCGCATC AACGTGTTCC CGGTCGCCGA CGGCGACACC
GGCACGAACC TCCTGCAGAC CATGAGCAGC GCGCTCGACT CGCTGCTCCG CTCCAACCCC
AGCGGCGCGG GCACGGCGCT CAGCGCGCTC GCCAAGGGCG CGCTCGCGGG CGCGCGCGGC
AACTCCGGAG TGATCCTGTC CCAGGTGCTG CGGGGTCTGG CCGAGGCGGT CGGCACCGCC
TCCACGGCGA CCGGGGCCTC GTTGCGCAAG GCGCTGCTGC GGGCCGACGA GCTGGCCGTC
GAGGCGGTGT CGGCCCCGTC GCCGGGCACC GTCCTGTCCG TCCTGCGCGC CGCCGCCGAG
GCCGCCCGCG ACTGCCCGAG CGACGAGCTG GGCGAGGTCG CCTCCGCCGC CTCCCGCGCG
AGCGCCGCCG CGCTCGCCGA GACCCCGAGG CAGCTCGCGG TCCTGGCCCG CGCGGGCGTG
GTCGACGCGG GCGGTCGCGG CCTGGTCGTC CTGCTCGACG CGCTGGCGGG CGTGGTGACC
GGGCACGTCC CCGAACCCGT CGTGCCCAGC CGGGTCCCGC GCCCGGCCGC CGCCCTCACC
ACCGCCCGCG AGTCCGGTTC GGCGGACTAC GAGTACGAGG TCATGTACCT GATCGACGGC
CTGGCGGGCG CGGGCGCCGA CCGGTCCGAC CGGTCGGCCG AGGAGGAGGC CGCCGCCGCG
CTCCGGACCG CGCTGCGCGC GCTCGGCGAC TGCGTCTCCG TGGTCGGCGA CGGCGACGGC
CTGTGGACCG TCCACGTGCA CTGCACCGAC ATCGGCGCGG CCGTCGAGGC GGGCGTCGAG
GCGGGCCGCC CGCACCGCAT CACCGTGTCC CGCTTCGCCG ACCAGGTCGC CGCCCAGGCG
GGCCGCTTCA CCCGCGACCG CGCGGTGGTC GCCCTGGTGC GCGGCGACGG CGTGGCCGAG
CTGTTCGAGG GCGAGGGCGC GGTCGTGCTG CGCGTCGCGG GCGCCCTGGA CCCGGCCGAC
CTGCTCGCCG TGCTCACCGG CACCCGCGCC CGGCACGTCG TGGTGCTGCC CGGCGTCCCC
GACCTCCGGT CCGAGGTGGA CGACGCGGTC TCCCAGGCCG TCGCGGCCGG CCAGGACGCG
GTGGTCGTGC CCATGACCTC ACCGGTGCAG GCGCTCGCCG CGCTCGCCGT GCACGACGCG
TCCCGCAGGG CGAACGACGA CGTGGTGGCG ATGGCCGAGG CCGCCGCCGC GACCCGCAGG
GGCGAGATCG GCCACGCCGT CCAGGAGGCC ATCACCTGGG TCGGCCGCTG CCTGCCCGGC
GACCTGCTGG CCCTGCTGGA CGGCGAGGTC GTGCACGTCG AGCCCGCCCC CGGCGACCGC
ACCGGCCTGG CCCGCGACCT GGTCGACCTG ATGCTCGTGC CCGGCGGCGA GCTGGTCACC
GCCCTGCTCG GCGAGGACGC CCCGGACGGC CTGGCCGAGG CGCTGGAGGC GCACCTGCGC
GTCGCGCACC CCGAGGTCGA GCTGGTCGTC TACCCCGGCG GCCTGCCCGG CGCGGTGCTC
GTGGTCGGCG TCGAGTAG
 
Protein sequence
MQALDASAIR RWADACVRSL AAHREDIDRI NVFPVADGDT GTNLLQTMSS ALDSLLRSNP 
SGAGTALSAL AKGALAGARG NSGVILSQVL RGLAEAVGTA STATGASLRK ALLRADELAV
EAVSAPSPGT VLSVLRAAAE AARDCPSDEL GEVASAASRA SAAALAETPR QLAVLARAGV
VDAGGRGLVV LLDALAGVVT GHVPEPVVPS RVPRPAAALT TARESGSADY EYEVMYLIDG
LAGAGADRSD RSAEEEAAAA LRTALRALGD CVSVVGDGDG LWTVHVHCTD IGAAVEAGVE
AGRPHRITVS RFADQVAAQA GRFTRDRAVV ALVRGDGVAE LFEGEGAVVL RVAGALDPAD
LLAVLTGTRA RHVVVLPGVP DLRSEVDDAV SQAVAAGQDA VVVPMTSPVQ ALAALAVHDA
SRRANDDVVA MAEAAAATRR GEIGHAVQEA ITWVGRCLPG DLLALLDGEV VHVEPAPGDR
TGLARDLVDL MLVPGGELVT ALLGEDAPDG LAEALEAHLR VAHPEVELVV YPGGLPGAVL
VVGVE