| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5962 |
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| Symbol | |
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| ID | 8330169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7008410 |
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| End bp | 7009285 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946393 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003103616 |
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| Protein GI | 256379956 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGAGC TGCCCGAGGT CGAAGTAGTC CGCCGAGGGC TGCACGAGCA CGTCACCGGC
CGCACCGTCG CCTCCGTCGA GGTGCTGCAC GCCCGAGCGA TCCGCCGTCA CCTCCCTGGG
GCGGCGGATT TCGCCGTTCG GCTGACCGGT CAGCGCATGG ACGCGGCGCG CAGGCGCGGC
AAGTACCTGT GGGTCGACCT GTCCGGCGGC GAGGCGGTGC TCGCGCACCT CGGGATGAGC
GGGCAGATGC TCGTCCAGCC GGTCGGGGCG CCCGACGAGA AGCACCTGCG GGTCCGGGTC
GTGTTCGAGG ACGATGGCCC GGAGCTGCGG TTCGTGGACC AGCGGACGTT CGGCGGGCTC
GCGCTGGACG AGCTGGTGGA GGTCGACGGG ACCTGGTTGC CCCGGCAGGT CTCGCACATC
GCCCGCGATC CGATGGACCC GGAGTTCGAC GCCGACGCGG CCGTGCGGGC GCTGCGGTCG
CGGAAGACGG ACGTGAAGCG GGCGCTGCTC GACCAGACGC TCGTGTCCGG GGTCGGGAAC
ATCTACGCCG ACGAGTCGTT GTGGCGCGCC CGGCTGCACG GGTTGCGGCC CACGGCCAAG
CTGACCACCG CCAAGACCGC CGAGCTGCTC GGGCACGCCA CGCAGGTGAT GCTGGAGGCG
CTCGGGCAGG GCGGGACGTC GTTCGACGCG CTGTACGTCA ACGTGAACGG GCAGTCGGGG
TACTTCGACC GGTCGCTCGC GGTGTACGGG CAGGAGGACC GGCCGTGCGC GCGGTGCGGG
ACGGCGATCG TGCGGGAGCC GTTCATGAAC CGGTCCTCGT ACTCGTGCCC CCGGTGCCAG
CCCCGGCCTA GGGACGCCAA GACCGTCGCC CGTTAG
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| Protein sequence | MPELPEVEVV RRGLHEHVTG RTVASVEVLH ARAIRRHLPG AADFAVRLTG QRMDAARRRG
KYLWVDLSGG EAVLAHLGMS GQMLVQPVGA PDEKHLRVRV VFEDDGPELR FVDQRTFGGL
ALDELVEVDG TWLPRQVSHI ARDPMDPEFD ADAAVRALRS RKTDVKRALL DQTLVSGVGN
IYADESLWRA RLHGLRPTAK LTTAKTAELL GHATQVMLEA LGQGGTSFDA LYVNVNGQSG
YFDRSLAVYG QEDRPCARCG TAIVREPFMN RSSYSCPRCQ PRPRDAKTVA R
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