| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5952 |
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| Symbol | |
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| ID | 8330159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6997724 |
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| End bp | 7001308 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946383 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003103606 |
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| Protein GI | 256379946 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGGCG TGCACCTCAA GAGCCTGACG CTGAAGGGCT TCAAGTCCTT CGCCTCGGCT
ACCACCCTGC GCTTCGAGCC CGGCATCACG TGCGTGGTCG GCCCCAACGG GTCCGGCAAG
TCGAACGTGC TCGACGCGCT GCGCTGGGTG ATGGGCACCC AGGGCGCGAA GGACCTGCGC
GGCGGCAAGA TGGAGGACGT CATCTTCGCG GGCACCTCCG GCCGCGCGCC GCTGGGCCGC
GCCGAGGTCA CCCTCACCAT CGACAACGCC GACGGCGCGC TGCCCATCGA GTACACCGAG
GTGTCGATCA CCCGCCGGAT GTTCCGCGAG GGCGCCACCG AGTACGAGAT CAACGGCAGC
TCGTGCAGGC TCATGGACAT CCAGGAGCTG CTGTCGGACT CCGGCATCGG CCGCGAGATG
CACGTCATCG TCGGCCAGGG CCAGCTCTCC GCGATCCTGG AGTCCAAGCC GGAGGAGCGC
CGCGCCTTCA TCGAGGAGGC CGCGGGCGTC CTCAAGCACC GCAAGCGCAA GGAGAAGGCG
CTGCGGAAGC TGGAGGCGAT GCAGGCCAAC CTGACCCGCC TCACCGACCT CACCGCCGAG
TTGCGCCGCC AGCTCAAGCC GCTGGGCAAG CAGGCCGAGA TCGCCCGGCG CGCCCAGACC
GTGCAGGCCG AGCTGCGCGA CTCCCGGATG CGCCTGCTCG CCGACGACCT GGTCACCCAG
CGCGAGTCGC TGGCCCGCGA CGAGCAGGAC GAGGCCGCCG CGCGCGCCCG CCGCGCCGAG
GTCGAGCGCT CGCTCCAGCA GGCGCAGGTG CAGCAGAACG AGCTGGAGGA GGTCGTGTCC
GCCGACGCGC CCAAGCTCCA GCAGGCCCAG GACACCTGGT ACCGGCTCTC CGCGCTGGAG
GAGCGGCTGC GCGGCACGGT CCGGCTGGCC GTCGAGCGCG AGCGGCACCT GAAGGCGTCG
GTCGACGCGC CCAGGGGCGG GCGCGACCCG GAGGAGCTGG AGGCCGAGGC CGAGCAGACC
GCCGCGCTGG AGCTGGAGCT GCAGGAGGGC GTCACCGAGG CGCGGGTCGG GCTGGCCGAG
GCCGTGGAGA CCCGCGCCGA GCTGGAGCGC GTGGTGTCCG CCGCCGAGAA GGCGCACCTG
GCGGCCGTGC GGGCGATCGC CGACCGGCGC GAGGGACTGG CCCGGCTGTC CGGTCAGGTG
GAGGCGCTGC GGTCCAAGAC CAACGCCACC GCCGAGGAGA TCGAGCGGCT GTCGACGGCG
CTGACCGAGG CCGTCGAGCG GTCCGAGGTC GCCCAGGAGG AGCTGGCCGA GGCGCGCGAG
AGCACCGACA GCGAGGACGA GGACGACGCG GGCGTCCAGG AGCGGCACCG GCACGCGGTC
GAGGCCGAGG ACTCGGCGCG GCGGCGGGTC GAGGAGCTGG TCAAGGCCGA GCGCGCGGCC
GAGCGGGACA TCGCCTCGTG GAAGGCGCGC GTGGACGCCC TCTCGCTCGG GCTCACCCGC
AAGGACGGGG CGGGCGCGCT GCTCGCGTCC CAGCTGCCCG GCCTGCTCGG GTCGGTCGCG
GCGCTGCTGA CCGTGGAGCC CGGCAACGAG GTGGCGCTGG CCGCCGCGCT CGGGCCGGTC
GCGGACGCGA TCGCGGTGGC CTCCGGCGAC GACGCGCTCG CCGCGCTGGA GCTGCTCAAG
ACCGAGGACG CCGGGCGCGC CGGGGTCGTC ATCGGCGGCG GCGAGCCGCC GACGGGGGCG
CTGCCCGCGC TGCCGGGCGG CGCGCGCTGG GCCGTCGACC TGGTCCGCGC CCCCGAGTCG
CTGCGGCCCG CCGTGGCCCG CGCGCTGCAC GGGCTCGCCG TGGTCGCCGA CCTGGCCGCC
GCCGACGCGC TCGTCCGGGC GCACCCAGGG CTGCGGGCGG TCACCGGCGA GGGCGACCTG
CTCGGGTCGG ACTGGGCGAC CGGCGGGTCC GGGCGCAGCC AGAGCGTCAT CGAGGTGCAG
GCCGCCGTGG ACGAGGCGTC CGAGAAGCTC GCGCTCGCCG AGCGGGCGCT GGAGCACTCC
GGGCCCGCGC TGGACGGGGC GCGCGCCGAG CAGCAGGCCC GGCGCGGCGA GGCGTCGGCC
CTCAAGGAGC AGCTCAACGA GGCCAAGGTC CGCAGGGCCC GCTCGTCGGA GCGGCTCAAC
CGGCTCGCGG CGGCCGTGCG GTCCGCCGAG GCCGAGGTGG ACCGGGCGCG CGGGCAGCGG
GAGAAGGTCG AGGCCGCCCG CGAGGAGAAC CTGCTCAAGC TCGCCGAGCT GGAGGAGCGC
CTCCTGGTCG CCGAGGAGCA GCCGCTGGAC GACGAGCCCG ACACCGCCCA GCGCGACGAG
GCCGCCGCCG AGCTGGCCTC CGCCAGGCAG GGCGAGATGG ACGCCCGGCT GACGCTGCGC
ACCGCCGAGG AGCGGGCCCG CGCGCTGCAG GGCAAGGCCG AGGGCCTGCG GCGGGCCGCG
CGCGCCGAGC GGGAGACGCG GGAGCGCGCG CAGCGGGCGC TGGCGGCGCG GGCGCGCGGC
GCGGTCGTCG CCTCCGCCGT GGTGCGCGGC GGCGAGGTCG CGCTGGAGCG GATCGCGGTC
TCGCTGGACC GGGCCGCCCG CGAGCGGGAC GCCGCACAGG AGCGCAGGGC GCGGCACGAG
GCGCTGCTCG GGCAGGTGCG CGGGCTGGTG CGGGAGATGT CCGGCGAGCT GGAGAAGCTC
ACCGACGCGG TGCACCGGGA CGAGGTGCTG CGGGCCGAGC AGCGGCTGCG GATCGAGCAG
CTCGAGGTCA AGATCTCCGA GGACTTCGGG ATCGGGCTGG ACGACCTGGT CGCCGAGTAC
GGGCCGGACG TGCACGTGCC GCCGTCCGCC GGTGAGCTGG CCGAGTACGA GGCCGCCAAG
GAGCGCGGCG AGGCGGTCAC CGCCCCCATG CCGATCCCCT ACGACCGGGA CACCCAGGCG
CGGCGGGCCA AGCGCGCCGA GCGGGACCTG TCGCTGCTGG GCAAGGTCAA CCCGCTGGCG
CTGGAGGAGT TCGCGGCGCT GGAGGAGCGG TACAAGTTCC TGTCCAACCA GCTGGAGGAC
ATCAAGGCCA CCCGGCGCGA CCTGCTGACC GTCGTCAAGG AGGTCGACGA CAAGATCCTG
GAGGTCTTCA CGCTGGCCTA CGAGGACGTG GCCAGGGAGT TCCAGGTCGT GTTCGAGGTG
CTCTTCCCCG GCGGTGAGGG CCGGTTGGTG CTCACCGAGC CCGACGACAT GCTCACCACC
GGCATCGAGC TGGAGGCACG CCCGCCCGGC AAGAAGGTCA AGCGGCTGTC GCTGCTGTCC
GGCGGCGAGA AGTCGCTGGC CGCCGTGGCG ATGCTGGTGG CGATCTTCCG GGCCAGGCCG
TCGCCGTTCT ACGTCATGGA CGAGGTCGAG GCGGCGCTGG ACGACACCAA CCTGCACCGG
CTGATCAGCC TGTTCGAGCA GCTGAGGGAG CGCTCGCAGC TGCTGATCAT CACCCACCAG
AAGCCGACCA TGGAGATCGC CGACGCCCTG TACGGCGTGT CCATGCGCGG CGACGGCATC
AGCCAGGTGA TCTCGCAGCG GCTGCGCGGG CGCGAGGCGT CCTGA
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| Protein sequence | MRGVHLKSLT LKGFKSFASA TTLRFEPGIT CVVGPNGSGK SNVLDALRWV MGTQGAKDLR
GGKMEDVIFA GTSGRAPLGR AEVTLTIDNA DGALPIEYTE VSITRRMFRE GATEYEINGS
SCRLMDIQEL LSDSGIGREM HVIVGQGQLS AILESKPEER RAFIEEAAGV LKHRKRKEKA
LRKLEAMQAN LTRLTDLTAE LRRQLKPLGK QAEIARRAQT VQAELRDSRM RLLADDLVTQ
RESLARDEQD EAAARARRAE VERSLQQAQV QQNELEEVVS ADAPKLQQAQ DTWYRLSALE
ERLRGTVRLA VERERHLKAS VDAPRGGRDP EELEAEAEQT AALELELQEG VTEARVGLAE
AVETRAELER VVSAAEKAHL AAVRAIADRR EGLARLSGQV EALRSKTNAT AEEIERLSTA
LTEAVERSEV AQEELAEARE STDSEDEDDA GVQERHRHAV EAEDSARRRV EELVKAERAA
ERDIASWKAR VDALSLGLTR KDGAGALLAS QLPGLLGSVA ALLTVEPGNE VALAAALGPV
ADAIAVASGD DALAALELLK TEDAGRAGVV IGGGEPPTGA LPALPGGARW AVDLVRAPES
LRPAVARALH GLAVVADLAA ADALVRAHPG LRAVTGEGDL LGSDWATGGS GRSQSVIEVQ
AAVDEASEKL ALAERALEHS GPALDGARAE QQARRGEASA LKEQLNEAKV RRARSSERLN
RLAAAVRSAE AEVDRARGQR EKVEAAREEN LLKLAELEER LLVAEEQPLD DEPDTAQRDE
AAAELASARQ GEMDARLTLR TAEERARALQ GKAEGLRRAA RAERETRERA QRALAARARG
AVVASAVVRG GEVALERIAV SLDRAARERD AAQERRARHE ALLGQVRGLV REMSGELEKL
TDAVHRDEVL RAEQRLRIEQ LEVKISEDFG IGLDDLVAEY GPDVHVPPSA GELAEYEAAK
ERGEAVTAPM PIPYDRDTQA RRAKRAERDL SLLGKVNPLA LEEFAALEER YKFLSNQLED
IKATRRDLLT VVKEVDDKIL EVFTLAYEDV AREFQVVFEV LFPGGEGRLV LTEPDDMLTT
GIELEARPPG KKVKRLSLLS GGEKSLAAVA MLVAIFRARP SPFYVMDEVE AALDDTNLHR
LISLFEQLRE RSQLLIITHQ KPTMEIADAL YGVSMRGDGI SQVISQRLRG REAS
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