Gene Amir_5949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5949 
Symbol 
ID8330156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6995854 
End bp6996486 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content78% 
IMG OID644946380 
Producthypothetical protein 
Protein accessionYP_003103603 
Protein GI256379943 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTG GAGCGGGTGG CAGGACGGCC GACGACGGGG CTGGTGGGCC GGACGGCGCG 
CTGACCGGAG CCGACGTGCG GAGCGCGGCC GGGGAGTGCG CGGCGTTCCT GGCCGGGTTC 
GCGGACCGGG ACTGGGCGGT CCCCGTCCCC GGCCTGGACT GGACGGTCGC GCGGACCCTC 
GCGCACCTGG TGGACTGCCT GCGCTGGTAC GCGCTGGACC TCGCGGGCGG GGTGGAGGAG 
CTGGACTGCT GGCTGGAGCC GACCGACGCC ACCGCCGACC CCGCGATGCT GGTCAGGGTG 
CTGCGCGCCC AGTCCGAGGT GCTGGCCGCC ACGATCGACG CGGCCCCGCC CGGCCACCGG 
GGCTGGCACC CGAGCGGCCT TCCCGAGCCC GCCGGGTTCG CCGCGATGGC CTGCGACGAG 
CTGCTCGTGC ACACCTGGGA CGCGGGTCGC GGGCTCGGCG CGGAGTTCAC CCCGACCGGT 
CGCCAGGCCG CCGCGACGCT GGCCCGGCTG TTCCCCGCGC ACGAGCCCGG AGCGGACGCG 
TGGCGCGCCC TGCTGTGGGC CAACGGGCGC GTCGAGCTGC CCGGCAGGCC CCTGCGGACC 
GGGTGGAAGT GGCACGGCGA TCCCTTGACG TGA
 
Protein sequence
MAGGAGGRTA DDGAGGPDGA LTGADVRSAA GECAAFLAGF ADRDWAVPVP GLDWTVARTL 
AHLVDCLRWY ALDLAGGVEE LDCWLEPTDA TADPAMLVRV LRAQSEVLAA TIDAAPPGHR 
GWHPSGLPEP AGFAAMACDE LLVHTWDAGR GLGAEFTPTG RQAAATLARL FPAHEPGADA 
WRALLWANGR VELPGRPLRT GWKWHGDPLT