| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5909 |
|---|
| Symbol | |
|---|
| ID | 8330116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6951978 |
|---|
| End bp | 6952769 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644946341 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_003103564 |
|---|
| Protein GI | 256379904 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.166242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAG AACTCGACCA GGCACTCGAC CAGGCAGCAG TGCTCGACCA GGCAGCCCCG
ACGGGTGGCT ACCACCGGGT GATGCTCAAG CTCGGCGGCG AGATGTTCGG CGGCGGCGGG
GTCGGCGTCG ACCCGGACGT CGTGCAGACC GTCGCCCGCC AGATCGCCGC CGTGGTCCGG
ACCGGGGTCC AGGTCGCGGT CGTCATCGGC GGCGGCAACT TCTTCCGGGG CGCCGAGCTC
CAGCAGCGCG GCATGGACCG CAGCCGCGCC GACTACATGG GCATGCTCGG CACGGTCATG
AACTGCCTCG CCCTCCAGGA CTTCCTGGAG CGCGAGCACG GCATCGACAC CCGCGTGCAG
ACCGCCATCA CCATGGGCCA GGTCGCCGAG TCGTACATCC CGCGCCGCGC CATGCGCCAC
CTCGACAAGG GTCGCGTGGT CATCTTCGGC GGCGGCGCCG GAATGCCCTA CTTCTCCACC
GACACCACCG CCGCCCAGCG CGCGCTGGAG ATCGGGTGCG AGGTCGTCCT GATGGCCAAG
GCCGTGGACG GCATCTACAC CGCCGACCCG AGGACCACCC CGGACGCGCG CATGTTCGAC
AGCATCACCC ACCGCGAGGT CCTGGAGCGC GGCCTGAACG TCGCCGACGC GACCGCCTTC
AGCCTGTGCA TGGACAACAA CCTCCCGATC ATGGTGTTCA ACCTCCTCAC GGAGGGCAAC
ATCGCCCGCG CCGTGCGCGG TGAGAAGATC GGGACGTTGG TGAGCACCCC CGGTGCCCGC
CAGTCCGCCT AG
|
|---|
| Protein sequence | MSAELDQALD QAAVLDQAAP TGGYHRVMLK LGGEMFGGGG VGVDPDVVQT VARQIAAVVR
TGVQVAVVIG GGNFFRGAEL QQRGMDRSRA DYMGMLGTVM NCLALQDFLE REHGIDTRVQ
TAITMGQVAE SYIPRRAMRH LDKGRVVIFG GGAGMPYFST DTTAAQRALE IGCEVVLMAK
AVDGIYTADP RTTPDARMFD SITHREVLER GLNVADATAF SLCMDNNLPI MVFNLLTEGN
IARAVRGEKI GTLVSTPGAR QSA
|
|---|
| |