| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5902 |
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| Symbol | |
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| ID | 8330109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6945530 |
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| End bp | 6946636 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946334 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_003103557 |
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| Protein GI | 256379897 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.185229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCC TCCCCCTCGT CTTCGACGCG CCCAAGCGCG GGCTGCCGCC GCGCCACCTC
GCCGACCTCA CCGCCGAGCA GCGGCGCGAG GCCGTGGCCT CCCTGGGCGA GCAGCCCTTC
CGGGCCAACC AGCTGTCGAA CCACTACTTC GGCAGGCTCA CCGTCGACCC CGACGCCATG
ACCGACATCC CGGCCGCGGC CAGGGAGAAG CTGGTCGGCG ACCTCATGCC GCCGCTGTGG
ACCGAGGTCC GCAGCGTGGA GGCCGACGCG GGGACCACCC GCAAGACGCT GCTGCGCGCC
CACGACGGGA CGCTGGTGGA GAGCGTGCTC ATGCGCTACC CCGACCGCGC GACCCTGTGC
ATCTCCAGCC AGGCGGGCTG CGGCATGGCG TGCCCGTTCT GCGCCACCGG CCAGGGCGGG
CTCCAGCGCA ACCTGTCCAC CGCCGAGATC GTCGACCAGG TCCGGCGCGG CGCCGCCGCC
ATGCGCGACG GCCTGCTCCC CGGCGGCCCC GGCAGGCTCT CGAACATCGT GTTCATGGGC
ATGGGCGAGC CGCTGGCCAA CTACAAGCGG GTCATCGAGG CCGTGCACCG CATCTGCGAC
CCGGCCCCGG CAGGCCTGGG CATCTCGCAG CGCTCGGTCA CCGTCTCCAC GGTCGGCCTC
GTCCCGGCGA TCCGCAAGCT CACCGAGGAG AACCTGCAGG TCAGGCTCGC GGTGTCGCTG
CACACCCCGG ACGACGAGCT GCGCGACACG CTCGTGCCGG TGAACACCCG CTGGAAGGTC
GCCGAGGTCA TGGAGGCCGC GCGCGGCTAC GCCGACCGCA CCGGCCGCCG GGTGTCCATC
GAGTACGCGC TGATCAGGGA CATCAACGAC CAGGGCTGGC GCGCCGACAT GCTCGGCAAG
CTGCTGCGCA GGCACCTCGG CCCGCTGGTG CACGTCAACC TGATCCCGCT CAACCCCACG
CCCGGCTCGA AGTGGGACGC CTCGCCCAAG CCCGTGGAGC GCGAGTTCGT GCGGCGGGTC
AAGGAGCAGG GCGTCGAGTG CACGGTGCGC GACACCAGGG GCCAGGAGAT CGCGGCGGCC
TGCGGGCAGC TCGCCGCCGA GGGCTGA
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| Protein sequence | MTALPLVFDA PKRGLPPRHL ADLTAEQRRE AVASLGEQPF RANQLSNHYF GRLTVDPDAM
TDIPAAAREK LVGDLMPPLW TEVRSVEADA GTTRKTLLRA HDGTLVESVL MRYPDRATLC
ISSQAGCGMA CPFCATGQGG LQRNLSTAEI VDQVRRGAAA MRDGLLPGGP GRLSNIVFMG
MGEPLANYKR VIEAVHRICD PAPAGLGISQ RSVTVSTVGL VPAIRKLTEE NLQVRLAVSL
HTPDDELRDT LVPVNTRWKV AEVMEAARGY ADRTGRRVSI EYALIRDIND QGWRADMLGK
LLRRHLGPLV HVNLIPLNPT PGSKWDASPK PVEREFVRRV KEQGVECTVR DTRGQEIAAA
CGQLAAEG
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