| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5898 |
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| Symbol | |
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| ID | 8330105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6941551 |
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| End bp | 6942666 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946330 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_003103553 |
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| Protein GI | 256379893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACA CGCACGCCCC GGTCGAGGTC GGCCTGCACG GCGTGACGAA GCGGTTCTCC
GACCAGGTCG CCGTGGACGG CGTCGACCTG AACGTCCACG AGGGCGAGTT CTTCTCCGTG
CTCGGCCCGT CCGGCTGCGG CAAGACCACG CTGCTGCGGA TGATCGCGGG CTTCGCCGAC
CCGGACGAGG GCCGCATCGA GCTGGACGGC GTCGACATGG TCGGCGTGCC GCCGTACCGC
CGCGACGTGA ACACCGTCTT CCAGTCCTAC GCGCTGTTCC CGCACATGAG CGTGTGGGAC
AACGTCGCCT ACGGCGTCAA GCGCAAGGGC GTGCGCGGGG CCGAGCTGAA GAAGGCCGTC
GGCGAGCACC TGGAGCTGGT GCGGCTCGCG CAGTTCGCCA AGCGCCGCCC CACCCAGCTG
TCCGGCGGGC AGCAGCAGCG CGTGGCCATC GCCCGCGCGC TCGCCGCCGG TCCGCGCCTG
CTGCTGCTCG ACGAGCCGCT CGGCGCGCTG GACGCGGTGC TGCGCAAGGA GCTCCAGATC
GAGCTGATGC GCATCCAGCG CGAGGTCGGC ACCACCTTCC TCTACGTCAC CCACGACCAG
GAGGAGGCCC TCGTGCTCTC CCACCGGATC GCGGTGATGA ACGCGGGCAA GCTGGAGCAG
GTCGGCTACC CCGAGGACGT CTACGAGCGG CCCGCCACCC GGTTCGTCGC GGGCTTCATC
GGCACCTCGA ACATCCTGGC CGCCACCGTG TCCGGCGCGG ACGGGTCCTG GGTCGAGCTG
GACTCGCCCG GCGTCACCCG GCTGCGCGCC GCGCTCCAGC GCGACGTCAG GCGCGGCCAG
CGCGTGGAGG CCACGGTGCG CCCGGAGAAG GTGCACCTGT ACGACGAGAA CGAGCAGGCC
CCCAGCGGCT GGTGCGAGCT GACCGGGGTG GTGCGCGACG TGGTCTACAC GGGCGTGTCC
ACCCAGTACG TGGTCGACCT CCCCGGCGGC GGGGAGCTGG TCGCGTTCGC GCAGAACACC
CGTCGCGTCG ACGACGCGGG CTCGCCGGGG CAACCCGTGC GGATGGCCTG GGACCCCGAG
TACACCGTCC TGTTGGAGAA GAGCACCGAT GACTGA
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| Protein sequence | MPDTHAPVEV GLHGVTKRFS DQVAVDGVDL NVHEGEFFSV LGPSGCGKTT LLRMIAGFAD
PDEGRIELDG VDMVGVPPYR RDVNTVFQSY ALFPHMSVWD NVAYGVKRKG VRGAELKKAV
GEHLELVRLA QFAKRRPTQL SGGQQQRVAI ARALAAGPRL LLLDEPLGAL DAVLRKELQI
ELMRIQREVG TTFLYVTHDQ EEALVLSHRI AVMNAGKLEQ VGYPEDVYER PATRFVAGFI
GTSNILAATV SGADGSWVEL DSPGVTRLRA ALQRDVRRGQ RVEATVRPEK VHLYDENEQA
PSGWCELTGV VRDVVYTGVS TQYVVDLPGG GELVAFAQNT RRVDDAGSPG QPVRMAWDPE
YTVLLEKSTD D
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