| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5890 |
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| Symbol | |
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| ID | 8330097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6933764 |
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| End bp | 6934984 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946322 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003103545 |
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| Protein GI | 256379885 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CACGCAAGGT CCTGGTTCTC GGGTCCACGG GGTCGATCGG CACCCAGGCA
CTCGACGTGA TCTCCACCAG GCGCGACCAG TTCGCCGTCG CGGGGCTGTC CGCGGGCGGC
GCGGACCTCG CGGCGCTGGC CGCGCAGGCC CTGGACTTCG GCGCCCCGGC CGTCGCCGTG
GCCCGCCCCG ACTCGGCCGA GGACTTCGCC CTCGCCTACG ACGCCGAGGT CGCCCGCCGC
GGCCTCGCGC CCGCCGACCA CCGCAGGCCC CGGCTGCTGA CCGGACCGGA CGCCGCGAGC
GACCTGGTCG ACGCGGCCCC CGCCGACGTG GTGCTCAACG GCATCACCGG CTCCATCGGC
CTCGCCCCCA CCCTCCGCGC GCTCGCGTCC GGGGCCACCC TCGCGCTCGC GAACAAGGAG
TCCCTCATCG CGGGCGGCCC GCTGGTGCTC TCCGCCGCGA AGCCGGGCCA GCTCGTCCCG
GTCGACTCCG AGCACTCCGC GCTCGCCCAG TGCCTGCGCG GCGGTCGCGC CGACGAGGTC
GACCGGCTCG TGCTCACCGC CTCCGGCGGC CCGTTCCGGG GGCGCAAGCG CGCGGAGCTG
GCCGACGTCA CCGTCCAGCA GGCCATGGCC CACCCGACCT GGTCGATGGG CAACGTGATC
ACCATCAACT CGGCCACCCT GGTCAACAAG GGCCTGGAGC TGATCGAGGC GCACCTGCTG
TTCGGCGTGC CCTACGACCG GATCGACGTC GTCGTGCACC CCCAGTCGGT GATCCACTCC
ATGGTCACCT TCACCGACGG CTCCACCCTC GCCCAGGCCA GCCCGCCGGA CATGCGCCTG
CCCATCGCGC TCGGCCTGTC CTGGCCCGAC CGCGTTCCCG GCGCGGCCTC CGCGTGTACT
TTCAAAGAGC CGACCGCGTG GACGTTCGAG CCGCTGGACG ACGACACGTT CCCGGCGGTC
CGGCTCGCCA GGCGCGCGGG CACGGCGGGC GGTTGCCTGC CCGCCGTCTA CAACGCGGCC
AACGAGGAGG CGCTCGCCGC CTTCTTCGTG GGCGCGACGT CGTTCCTCTC CGTGGTCGAC
ACCGTGGAGC GGGTGCTGGA CGAGGCGGAC GGCTGGGCAC ACGACCCCGC CGACGTCGCC
GAGGTCCTCG AAGCCGAGCG CTGGGCTCGG ACGAGGGCTC GGGAACTGGT GGCCACTTCG
GTGGGGTCTG GGAGGGACTG A
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| Protein sequence | MSTPRKVLVL GSTGSIGTQA LDVISTRRDQ FAVAGLSAGG ADLAALAAQA LDFGAPAVAV
ARPDSAEDFA LAYDAEVARR GLAPADHRRP RLLTGPDAAS DLVDAAPADV VLNGITGSIG
LAPTLRALAS GATLALANKE SLIAGGPLVL SAAKPGQLVP VDSEHSALAQ CLRGGRADEV
DRLVLTASGG PFRGRKRAEL ADVTVQQAMA HPTWSMGNVI TINSATLVNK GLELIEAHLL
FGVPYDRIDV VVHPQSVIHS MVTFTDGSTL AQASPPDMRL PIALGLSWPD RVPGAASACT
FKEPTAWTFE PLDDDTFPAV RLARRAGTAG GCLPAVYNAA NEEALAAFFV GATSFLSVVD
TVERVLDEAD GWAHDPADVA EVLEAERWAR TRARELVATS VGSGRD
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